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Name : TM1040_0029 (TM1040_0029) Accession : YP_612024.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 29083 - 30393 bp Length : 1311 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGACCACTGGTTTTTTTGGCGATGTTTCCAAGATCACGTTCGAAGGGGCAGACAGCACCAACCCGCTGGCGTTTCGACA TTACAATCCCGACGAGGTGATCCTCGGTAAGCGGATGGAAGAGCATCTGCGGTTTGCAACCTGCTACTGGCACAACTTTG TGTGGCCGGGCGGTGATCCGTTTGGTGGTCAGACCTTTGATCGCCCTTGGTTCAAGGACACGATGCACGCCGCCAAGCTC AAGGCCGATGTGGCCTTTGAGATGTTCACGCTGCTGCAGTCGCCCTACTACTGCTTCCACGATGCGGACGTGCGGCCTGA AGGGGCGAACTTTGCGGAAAACACACGCAATCTCAACGAGATCGTCGACTACTTCGCGCAGAAGCAGGAAGAGACCGGCG TGAAGCTCCTCTGGGGCACCGCGAACCTCTTTTCAAACGCCCGCTACATGTCTGGGGCGTCGACCAACCCGGATCCGGAC GTCTTTGCGTTTTCGGCGGCGACGATCAAAACCTGCATGGATGCCACCCACCGTTTGGGCGGCGAGAACTATGTGCTCTG GGGCGGTCGCGAAGGCTATGAGACGTTGCTGAACACCGACCTCGCACAGGAAGATCAGCAAATGGGCCGGATGCTCAACA TGGTGGTCGAGTATAAGCATAAGATTGGCTTCAAAGGCGCGATCCTTGTGGAACCCAAGCCGCAGGAGCCCTCCAAACAT CAGTACGATTACGACGCGGCCACCGTTTACGGTTTCCTCAAGCGTCACGGGCTTGAAAACGAGGTGAAGCTCAATCTCGA ACAGGGGCATGCGATTCTTGCGGGCCATTCGTTTGAACACGAAATCGCAACGGCGCAAGCGCTGGGCATTTTTGGCTCGA TCGATATGAACCGCAATGATTACCAGTCGGGCTGGGATACAGATCAGTTCCCCAACAATACGCCCGAGGTGGCGCTGGCC TATTACCACATCCTGAAGCATGGCGGGTTCACGACAGGGGGCACCAACTTTGATGCCAAGCTGCGCCGTCAGTCCATCGA TGCCGAGGATCTCTTGATGGCGCATATCGGCGGCATGGACATCTGTGCGCGTGGCTTCAAGGCGGCTGCGGCTATGATCG AGGACGGTACCTTGGATCAATTTGTTACCGACCGCTATGCAGGCTGGCAGACCGATCCGGCGCAGGACATGCTGGCGGGC AAACTCTCGCTTGATGAGATTGCAAAGCGTGTCGAGGCCGAAGATATCAATCCCAAGCCGCGCTCCGGGCGGCAGGAATA TCTTGAGAACCTCATCAACCGGTTTGTCTGA Protein sequence : MTTGFFGDVSKITFEGADSTNPLAFRHYNPDEVILGKRMEEHLRFATCYWHNFVWPGGDPFGGQTFDRPWFKDTMHAAKL KADVAFEMFTLLQSPYYCFHDADVRPEGANFAENTRNLNEIVDYFAQKQEETGVKLLWGTANLFSNARYMSGASTNPDPD VFAFSAATIKTCMDATHRLGGENYVLWGGREGYETLLNTDLAQEDQQMGRMLNMVVEYKHKIGFKGAILVEPKPQEPSKH QYDYDAATVYGFLKRHGLENEVKLNLEQGHAILAGHSFEHEIATAQALGIFGSIDMNRNDYQSGWDTDQFPNNTPEVALA YYHILKHGGFTTGGTNFDAKLRRQSIDAEDLLMAHIGGMDICARGFKAAAAMIEDGTLDQFVTDRYAGWQTDPAQDMLAG KLSLDEIAKRVEAEDINPKPRSGRQEYLENLINRFV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-100 | 48 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-100 | 48 |
