Gene Information

Name : TM1040_2849 (TM1040_2849)
Accession : YP_614843.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : ATP-dependent protease peptidase subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG5405
EC number : -
Position : 3019981 - 3020538 bp
Length : 558 bp
Strand : +
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGGCAGAGGATCAATTCCCCGGCTGGCATGGCACAACCATCATCGGGGTGCGCAAAGGGGACGAGGTAGTCGTCGCAGG
GGACGGTCAAGTCTCGCTCGGTCAGACCGTGATCAAGGGCAGTGCCCGCAAGGTGCGCCGCCTGTCGCCCGGCGGATATG
ACGTGGTGGCAGGCTTTGCCGGATCGACGGCGGATGCCTTCACCCTCCTTGAGCGGCTCGAAGCCAAACTGGAGGCAACG
CCAGGACAGCTTCAGCGCGCGAGTGTCGAGCTCGCCAAGGACTGGCGCACCGACAAATACCTGCAAAAACTAGAGGCAAT
GCTGATCGTCACCGATGGCAAGGATCTCTATGTCATCACCGGCGCTGGCGATGTGTTGGAACCAGAACATGATGTGGCCG
CCATCGGGTCTGGCGGCAACTTTGCCCTGGCAGCGGCGCGCGGCATGATGGACAGCGACCGCGACGCAGAAACAGTGGCC
CGTGACGCAATGGCGATCGCCTCTGACATCTGCGTCTACACCAACGGCAACCTCACGGTGGAGCGCATCGGCAAATGA

Protein sequence :
MAEDQFPGWHGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARKVRRLSPGGYDVVAGFAGSTADAFTLLERLEAKLEAT
PGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGKDLYVITGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRDAETVA
RDAMAIASDICVYTNGNLTVERIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 1e-33 44