|
Name : TM1040_2737 (TM1040_2737) Accession : YP_614731.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Resistance Product : methionine gamma-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : - Position : 2881941 - 2883143 bp Length : 1203 bp Strand : - Note : catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine DNA sequence : ATGTCCGAGACCAAAGGCTTTGCCACCCGCGCCATCCACCACGCCTATGACCCGATGCAGAACGAGGGCGCGCTGACGCC GCCGCTGCATCTGACCTCCACCTTCGTGTTCGAAAATGCCGAAGCCGGCGGCGAGATGTTCGCAGGCGAGCGCGAGGGGC ATATCTACAGCCGAATCTCGAACCCGACCTGTTCGCTTCTGGAGCAGCGTATCGCAACGCTAGAAGGGGCCGAAGCCGGT CTGGCGCTGGCAAGCGGCATGGGCGCGGTGACGGCGATTCTCTGGACGCTCCTCAGCCCCGGTGACGAGGTGATCGTCGA CAAGACGCTCTATGGGTGCACCTTTGCCTATATGCGCCATGGGCTTGCAAAATGGGGCGTGACCATCACCCACGTCGACA TGACCGACCCCGCCGCCCTGAGCGCCGCCGTGAGCGAGAAGACCCGCGTCGTCTATTTCGAGACGCCCGCCAACCCCAAC ATGCGCTTGGTCGACATCAAACGCGCCGCAGAGATTGCGCATTCCGTCGACGCGCGCGTTGTGGTCGACAACACCTATGC GACGCCCTACCTCACGCGCCCGATCGAGCTTGGCGCGGATCTGGTGCTGCATTCGGCGACCAAATACCTTGGTGGTCACG GCGATGTGGTCGCAGGGCTTGTGGCGGGCAGCGCCGAGCTTTTGACCGAAATCCGCCTTGTCGGCATGAAGGACATGACC GGTGCGGTGATGGCGCCCTTCAATGCGATGCTGATCATGCGCGGCTTGAAAACACTGGCGCTACGGATGGACCGTCATTG TGCCTCGGCGCAGACCGTCGCGGAGTGGCTAGAGGCCCAGCCCGGCGTCGCCAAGGTCTATTTCCCCGGTCTCAAGAGCT CTGAACAGCACGAGATCGCCAAGGCGCAGATGGCGCAGCCCGGCGGCATGATTGCCTTTGAACTCGAGGGCGGCATGGAG GCCGGGATCAGCCTGATGAACCGCCTGCAGATGATCCAGCGCGCGGTGTCGCTTGGCGATGCGGAGACGCTCATCCAGCA CCCGGCTTCGATGACACATTCCACCTATACCCCCGAGGAACGCGCGGAACATGGCATCAGCGATGGCTTGGTGCGCTTGT CCGTGGGGCTTGAAGAGGTTTCGGACATTCTCGATGATCTTCAGCAAGCTCTGTCGCCTCAGATGCGTCAGGCTGCCGAG TGA Protein sequence : MSETKGFATRAIHHAYDPMQNEGALTPPLHLTSTFVFENAEAGGEMFAGEREGHIYSRISNPTCSLLEQRIATLEGAEAG LALASGMGAVTAILWTLLSPGDEVIVDKTLYGCTFAYMRHGLAKWGVTITHVDMTDPAALSAAVSEKTRVVYFETPANPN MRLVDIKRAAEIAHSVDARVVVDNTYATPYLTRPIELGADLVLHSATKYLGGHGDVVAGLVAGSAELLTEIRLVGMKDMT GAVMAPFNAMLIMRGLKTLALRMDRHCASAQTVAEWLEAQPGVAKVYFPGLKSSEQHEIAKAQMAQPGGMIAFELEGGME AGISLMNRLQMIQRAVSLGDAETLIQHPASMTHSTYTPEERAEHGISDGLVRLSVGLEEVSDILDDLQQALSPQMRQAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-56 | 41 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-57 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_2737 | YP_614731.1 | methionine gamma-lyase | BAC0207 | Protein | 2e-115 | 65 |
