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Name : TM1040_2549 (TM1040_2549) Accession : YP_614543.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2690971 - 2692563 bp Length : 1593 bp Strand : - Note : PFAM: ABC transporter related: (1.1e-61) Oligopeptide/dipeptide ABC transporter-like: (2e-06); SMART: ATPase: (6.9e-20); KEGG: sil:SPO3534 oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein, ev=0.0, 78% identity DNA sequence : ATGACACAAGCGCCAATTCTGCAGGTCAAGGACCTTCGGGTCGCCTTTCGTCAGGACGGTCAGCGGGTTGAGGCCGTCAA AGGGGTGTCCTTTGCCCTGTCTCGTGGCGAGACGGTGGCTTTGGTGGGCGAGTCGGGCTCCGGCAAATCGGTCTCGGCGC TTTCGACGGTGCAGCTCCTTGGTGATAGCGCCGAGGTCTCCGGCTCGGTGAACTATGACGGACAGGAAATGATCGGCGCC GATGAACGTACCCTGCGACGGGTGCGCGGCAATGACATCTCCTTCATTTTCCAGGAGCCGATGACCTCTCTGAACCCGCT GCATACGATCGAAAAACAGTTGGGCGAGGCGCTTGCGCTACATCAGGGAGTGATGGGAGAGGACGCCCGCGCGCGTGTGC TGGACCTGTTGAATAAGGTTGGTATCCGGGACGCGGAAACCCGACTGGGGGCTTATCCGCACCAGCTTTCTGGCGGTCAA CGTCAGCGTGTAATGATCGCAATGGCGCTCGCCAACAAACCCGACGTTCTGATCGCGGACGAGCCCACAACGGCGCTCGA TGTGACCATTCAGGCGCAGATCCTCGATCTCCTTGCGGATCTGAAACAGAGCGAGGGGATGGGGCTTTTGTTCATCACCC ATGACCTCTCGATTGTGCGCCGTATTGCGGATCGGGTCTGCGTGATGAAATCCGGTGAAATTGTCGAGGAAGGTCCAACG GCTGAGCTGTTTGCAAACCCACAGCACCCCTACACCCAGAAACTCCTGGCGGCAGAACCCTCCGGTCGACCCGCGCCGAT CCCGGAAGGGGCAACCGAATTCGTCAGTGCCAAGGATCTCAAGGTCTGGTTTCCCATCCAGCGGGGGCTACTGAAGCGCA TGGTTGGCCATGTCAAGGCGGTCAATCCCATGTCGCTCTCGGTGCGCGCCGGGGAAACTTTGGGAATTGTAGGCGAATCC GGCTCGGGCAAAACCACGATGGCACTTGCGATCATGCGCCTTATCGCCTCCGAAGGCGAGGTGCGCTTTCAGGATCAGGA CCTGCGCCAATGGTCCACGCGGGACCTGCGCCGGTTGCGCAAGGACATGCAGATCGTGTTTCAGGATCCGTTTGGCTCGC TGTCTCCGCGTATGACATGCCAGCAGATCATTGCCGAAGGTCTGGCAATTCATGAGGTTGACCAACATCGTAAGCCGCGT GATCTTGTGGCTGATGTAATGCAGGAAGTGGGTCTCGACCCTGCCACCATGGACCGCTATCCACATGAATTCTCAGGTGG GCAGCGTCAGCGCATTGCCATCGCCCGTGCAATGGTTCTGCGCCCCAAGCTGGTGGTTCTGGACGAGCCGACCTCGGCCC TTGATATGACGGTCCAGGTGCAGATCGTGAACCTGCTGCGCGATCTTCAGGCCCGCTACGGGCTTGCCTATCTCTTCATC AGCCATGACCTCAATGTGGTGCGCGCCATGTCGCATGACATCCTGGTGATGAAAGCCGGAGACGTGATCGAGCAAGGCCC CGCCGAGGAGGTATTTGCCAATCCCAAAGAAGAATACACACGGCATCTGCTCTCTGCCGTGACGGGTGCCTAG Protein sequence : MTQAPILQVKDLRVAFRQDGQRVEAVKGVSFALSRGETVALVGESGSGKSVSALSTVQLLGDSAEVSGSVNYDGQEMIGA DERTLRRVRGNDISFIFQEPMTSLNPLHTIEKQLGEALALHQGVMGEDARARVLDLLNKVGIRDAETRLGAYPHQLSGGQ RQRVMIAMALANKPDVLIADEPTTALDVTIQAQILDLLADLKQSEGMGLLFITHDLSIVRRIADRVCVMKSGEIVEEGPT AELFANPQHPYTQKLLAAEPSGRPAPIPEGATEFVSAKDLKVWFPIQRGLLKRMVGHVKAVNPMSLSVRAGETLGIVGES GSGKTTMALAIMRLIASEGEVRFQDQDLRQWSTRDLRRLRKDMQIVFQDPFGSLSPRMTCQQIIAEGLAIHEVDQHRKPR DLVADVMQEVGLDPATMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQARYGLAYLFI SHDLNVVRAMSHDILVMKAGDVIEQGPAEEVFANPKEEYTRHLLSAVTGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-92 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-92 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-92 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-92 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-105 | 43 |
