|
Name : TM1040_2493 (TM1040_2493) Accession : YP_614487.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2633749 - 2635221 bp Length : 1473 bp Strand : + Note : KEGG: sil:SPO3328 succinate-semialdehyde dehydrogenase, ev=0.0, 79% identity; TIGRFAM: succinic semialdehyde dehydrogenase: (2.6e-302); PFAM: aldehyde dehydrogenase: (1.4e-222) DNA sequence : ATGCTCGACGCGACAACCGACCTGAAATCCCTTCTGGCGGACCCCACCCTGCTGGAAGACCGGGCCTACATCAATGGCGC TTTTGTCGCTGGCGAGGGCACATTTGAAGTGACCAACCCGGCGCGCGGTGATGTGATCGCCAATGTGGCGGATGTCAGCC GCATGCAAGCCCGCGACGCCATTGCAGCAGCACAGGGCGCGCAAAAGGAATGGGCGAAATGGACTGGCAAGGAGCGCGCA GGCGTTCTGCGCAAATGGTTCGACCTGATGATGGCCCATCAGGAAGATCTCGCCGTGATCCTGACGGCTGAAATGGGCAA GCCGCTGGCCGAGGCACGCGGCGAAATCGCCTACGGTGCCTCTTTCATTGAATTCTTTGCCGAAGAGGCCAAGCGCGTCT ATGGCGAAACCATTCCTGGTCACCAACGCGACAAACGGATCACCGTGATCAAGCAACCCATTGGCGTTGCCGCTTCGATC ACGCCATGGAATTTCCCCAACGCCATGATCACCCGCAAGGCAGGGCCGGCACTGGCGGCCGGCTGTGCCTTTGTGGCGCG CCCGGCCTCTGAAACACCGCTCTCCGCCACCGCACTCGCCGTATTGGCAGAACGCGCGGGCATCCCTGCGGGTGTTTTCA ATGTCATCCCCGCTTCGGACGCCTCCGGCATTGGCAAGGAATTCTGCGAGAACCCGATTGTGCGCAAGCTGACGTTTACC GGGTCAACCAACGTCGGTCGAATCCTGCTCCGCCAAGCAGCGGATCAGGTGATGAAATGCTCCATGGAGCTCGGCGGCAA CGCACCTTTCATCGTGTTCGATGACGCCGATCTCGATGCGGCGGTCGAGGGCGCCATCATGTGCAAGTTCCGCAATAATG GCCAAACCTGCGTCTGTGCCAACCGGATCTATGTGCAGTCTGGGATCTATGATGCGTTTGCCGCCAAGCTGAAGGAAAAA GTCGAGGCCATGAAGGTCGGAGACGGGCTTGAGGATGGCACGCACTTTGGCCCATTGATCTCTGAGGCTGCAGTCAAGAA GGTCGAAGACCACATCGCGGATGCCATGGACAAGGGTGCCGAGGTAATCCTAGGCGGCGCGCCATCAGAGCTCGGTGGCA CCTTCTTTGAACCCACCATCGTGACCGGCGCGACACCGGACATGGCTTTCGCGCAGGATGAGACCTTTGGCCCGCTCGCG CCGCTCTTCAAGTTTGAGACCGAAGACGAGGTGATCGAGATGGCGAATGACACCATCTTTGGCCTTGCATCCTATTTCTA TGCCAAGGATCTGAGCCGCGTGTACAAGGTCGCCGAGGCGCTGGAATACGGAATTGTGGGGATCAATACAGGGATTATTT CTACCGAGCTTGCGCCCTTTGGAGGTGTAAAACAATCCGGGCTTGGACGGGAAGGCAGCCATCACGGCATCGAGGACTAT CTCGAAATGAAGTACCTCTGCATGTCCGTTTAA Protein sequence : MLDATTDLKSLLADPTLLEDRAYINGAFVAGEGTFEVTNPARGDVIANVADVSRMQARDAIAAAQGAQKEWAKWTGKERA GVLRKWFDLMMAHQEDLAVILTAEMGKPLAEARGEIAYGASFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASI TPWNFPNAMITRKAGPALAAGCAFVARPASETPLSATALAVLAERAGIPAGVFNVIPASDASGIGKEFCENPIVRKLTFT GSTNVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCANRIYVQSGIYDAFAAKLKEK VEAMKVGDGLEDGTHFGPLISEAAVKKVEDHIADAMDKGAEVILGGAPSELGGTFFEPTIVTGATPDMAFAQDETFGPLA PLFKFETEDEVIEMANDTIFGLASYFYAKDLSRVYKVAEALEYGIVGINTGIISTELAPFGGVKQSGLGREGSHHGIEDY LEMKYLCMSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-140 | 62 |
