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Name : TM1040_0227 (TM1040_0227) Accession : YP_612222.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 241908 - 242441 bp Length : 534 bp Strand : + Note : KEGG: sil:SPO3516 transcription termination/antitermination factor NusG, ev=2e-85, 87% identity; TIGRFAM: transcription termination/antitermination factor NusG: (9.3e-79); PFAM: transcription antitermination protein NusG: (4.7e-41) KOW: (4.4e-09); SMART: DNA sequence : ATGGCGAAACGGTGGTATTCGGTCAGCGTTCTTTCGAACTTCGAAAAGAAAATCGCAGAACAGATTCGCACCGCGGTCGT GGAGCAGGGTCTAGAGGACGAGATCGACGAGGTTCTGGTTCCCACCGAGGAAGTGATCGAAATTCGCCGGGGCAAGAAAG TCTCGACCGAGCGCCGCTTCATGCCGGGCTATGTTCTGGTTCACATGGAAATGTCCGACCAGGGCTATCACCTGATTTCT TCCATCAATCGCGTCACCGGTTTCCTCGGTCCGCAAGGCCGCCCGATGCCGATGCGTGATGCCGAAGTGCAGGGCATCCT GGGCCGCGTCGAAGAAGGTGTCGAGGCGCCGCGTACACTCATTTCCTTTGAGGTGGGCGAAAAGGTCAAAGTCAACGACG GCCCCTTCGAGGATTTCGACGGTATGGTCGAGGGCGTGGACGACGAGAACCAGAAGCTCAAGGTCACGGTGTCCATCTTT GGTCGCGAGACCCCGGTGGAGCTCGACTTCACGCAGGTCACCAAACAGGTTTGA Protein sequence : MAKRWYSVSVLSNFEKKIAEQIRTAVVEQGLEDEIDEVLVPTEEVIEIRRGKKVSTERRFMPGYVLVHMEMSDQGYHLIS SINRVTGFLGPQGRPMPMRDAEVQGILGRVEEGVEAPRTLISFEVGEKVKVNDGPFEDFDGMVEGVDDENQKLKVTVSIF GRETPVELDFTQVTKQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 6e-37 | 44 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 6e-37 | 44 |
