Gene Information

Name : TM1040_1676 (TM1040_1676)
Accession : YP_613671.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1774948 - 1775424 bp
Length : 477 bp
Strand : -
Note : TIGRFAM: single-strand binding protein: (7.4e-57); PFAM: single-strand binding protein/Primosomal replication protein n: (4e-32); KEGG: sil:SPO1637 single-strand binding protein, ev=5e-63, 68% identity

DNA sequence :
ATGGCTGGATCGCTGAACAAAGTTATGCTGATAGGCAACCTTGGCCGCGATCCGGAAGTCCGGACCTTCCAGAGCGGAGG
CGAGGTCTGCAACCTCCGCATCGCGACCTCCGAATCTTGGAAAGACCGCAACACGGGCGAGCGCCGCGAAAAGACCGAAT
GGCACTCCGTTGCGATCTTTAATGAAGGTCTGGTGCGCGTGGCCGAGCAATACCTGCGCAAAGGGTCAAGGGTTTATGTC
GAAGGCCAGCTACAAACCCGCAAGTGGCAGGACCAGAGCGGTCAGGACCGCTATTCAACCGAGATCGTGTTGCATGGCTT
TGGCTCCACGCTAACCATGCTGGACGGGGCTGGAGGAACTCAGCAGTCCGGCTATGAAAATAGCGGCTACGGCGGTGGAT
ACGACTCCGATGGAACTCAGGGCAGCGGATACGGCTCTGACAGTCAGAGCATCGATGACGACGAGGTGCCTTTCTGA

Protein sequence :
MAGSLNKVMLIGNLGRDPEVRTFQSGGEVCNLRIATSESWKDRNTGERREKTEWHSVAIFNEGLVRVAEQYLRKGSRVYV
EGQLQTRKWQDQSGQDRYSTEIVLHGFGSTLTMLDGAGGTQQSGYENSGYGGGYDSDGTQGSGYGSDSQSIDDDEVPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-26 55