Gene Information

Name : TM1040_1645 (TM1040_1645)
Accession : YP_613640.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : resolvase-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1750371 - 1751012 bp
Length : 642 bp
Strand : -
Note : PFAM: Resolvase-like: (8.9e-52); KEGG: ece:Z0318 DNA invertase from prophage CP-933H, ev=1e-33, 49% identity

DNA sequence :
GTGGCGTCCGAATCCGAGAACCAGCCGACACGCAAGATCGGATACGCTCGCGTCTCCACTGCCGACCAAAACCCGGATAT
GCAGATCCATGAGCTGAAGCGGTACGGCGTCCCAGAGGAATTGATCTTTGTGGACCGGGCCAGCGGCGGCACCATGAAGC
GACCCCAGTTCATGAGGGCGCTGAGGTATGCCCAATATGAAGGGACGGAGCTGGTCGTCTGGAAGCTGGACCGCCTTGGG
CGGACCCTTGGCGGCGTGCTGGATACGCTCAAGCTGCTGTCAGACCGCGGCGTTACCTTCGTCAGCCTGACGGAGCGGAT
CGACACCACGGGCCCTATGGGCAAGGCTATGATCCACCTTCTGGCCGTCTTCGCCGAACTGGAGCGAGACCTGATCGTGG
AGCGCACCAAGGCCGGGATCGAGCGGGCGAAAGAGCGCGGCGACGTGGGTGGCCGACCAAAGGCTATGACGCCGGAGCGG
GTTGCCAAGGCAGAGGAAATGCTTGCCGCTGGTGAGCGCGGCAACACGGTCTGGAAGGCGATGAAGGAACTCGATGGGCC
GACGATCAGCCGGGCGGCATACTACGCCTGGCAGAAGGAATGGGACGCGGGCCACCGCGCCCCGGATATCGTTGGAGAGT
GA

Protein sequence :
MASESENQPTRKIGYARVSTADQNPDMQIHELKRYGVPEELIFVDRASGGTMKRPQFMRALRYAQYEGTELVVWKLDRLG
RTLGGVLDTLKLLSDRGVTFVSLTERIDTTGPMGKAMIHLLAVFAELERDLIVERTKAGIERAKERGDVGGRPKAMTPER
VAKAEEMLAAGERGNTVWKAMKELDGPTISRAAYYAWQKEWDAGHRAPDIVGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-22 47
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 4e-21 44
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 5e-21 44
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 5e-21 44
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-24 43
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-24 43
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-24 43
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-24 43
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-24 43
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-24 43
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-24 43
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-24 43
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-24 43
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 1e-23 42
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 1e-23 42
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 2e-23 41