Gene Information

Name : TM1040_0015 (TM1040_0015)
Accession : YP_612010.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Virulence
Product : UDP-glucose pyrophosphorylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 16023 - 16916 bp
Length : 894 bp
Strand : +
Note : TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase: (3.1e-138); PFAM: Nucleotidyl transferase: (1.7e-12); KEGG: jan:Jann_0218 UTP-glucose-1-phosphate uridylyltransferase, ev=1e-126, 75% identity

DNA sequence : 
ATGCCTAGAAAAGTTACAAAAGCTATTTTCCCTGTTGCCGGTCTTGGCACGCGTTTTTTGCCTGCCACGAAGTCTGTGCC
CAAAGAGATCATGACTCTCGTTGACCGGCCTCTCGTGCAATATGCCATCGACGAGGCGCGCGCTGCTGGCATCAAGGAAT
TCATCTTTGTGACATCTCGCGGCAAAGGAGCGCTTGAAGACTATTTCGACCACGCGCCTGTTCTGGAACAGGAACTGCGC
AAAAAGGGCAAGGATCAGCTTCTCGAAGTTCTCAAGGCGACCAATATGGGATCAGGAGATATTGCCTATATTCGTCAGCA
CAAGGCGCTGGGCTTGGGCCATGCGGTCTGGTGCGCGCGCCGTCTGATCGGGGATGAGCCATTTGCGGTGATGCTGCCTG
ACGATGTGATCGCGGCCGACAAGCCCTGCCTTCAGCAGATGGTCGAAGCCTATGCTGAAACCGGCGGCAACATGGTGGCA
GCGATGGAAGTTGCGCCAGAGAAAACGTCGTCTTACGGGATCCTCGACGTCAAGGATAGCAAGGATGCCGTGATGCCGAT
CAATGCGATGATCGAAAAGCCGAGCCCCGAAGAAGCGCCCTCGAACCTCGCAGTGATCGGGCGTTATATTTTGTCGCCTT
CGGTGCTTCAGAATCTCAATAAGCGCAAACAAGGGGCGGGCGGGGAGATCCAACTGACCGACGCGATTGCGGAGGATATT
GCGCGGGACGTGCCGGTTTGTGGCTACCGTTTCAAAGGGCGCCGCTTTGATTGTGGCTCCAAGTCTGGGTTCTTGCAGGC
TACGGTCGCCTTTGCGTTGGAACGTGAAGAACTGCGCGATGATCTCATGGAGTATCTTTCGACCCTGTCGGCCCATCGAC
AGGCTGCTGAATAA

Protein sequence : 
MPRKVTKAIFPVAGLGTRFLPATKSVPKEIMTLVDRPLVQYAIDEARAAGIKEFIFVTSRGKGALEDYFDHAPVLEQELR
KKGKDQLLEVLKATNMGSGDIAYIRQHKALGLGHAVWCARRLIGDEPFAVMLPDDVIAADKPCLQQMVEAYAETGGNMVA
AMEVAPEKTSSYGILDVKDSKDAVMPINAMIEKPSPEEAPSNLAVIGRYILSPSVLQNLNKRKQGAGGEIQLTDAIAEDI
ARDVPVCGYRFKGRRFDCGSKSGFLQATVAFALEREELRDDLMEYLSTLSAHRQAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 4e-60 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TM1040_0015 YP_612010.1 UDP-glucose pyrophosphorylase VFG0964 Protein 2e-53 42