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Name : TM1040_1397 (TM1040_1397) Accession : YP_613392.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1488653 - 1490743 bp Length : 2091 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGAGCGGTCGCCCAGAACAATTGTTCCCGCTTTTCGCGGAACTTGAGACCTTGCAAGGCGTCGGACCAAAGATTGCCGA GCATTTTGCGCAGCTGCATATCACGGCCCCCCGCGATCTTCTGTTCTCGCTGCCATACAGCGTTGTTGACCGGCGTAGGC GCGAAACCATCCGGGGGTTGGATCTGCCGACGACCGCAACGGTCGAAGTCACCGTGGGGCGCCATCGTCCGGCCCGCAAC CGGGGCGGTGCCTATCGCATCGACGTGACGGACCAGGAGACTGAGTTTCAGCTGGTCTTTTTCCACGGCCGAAGCCGGTA TCTGACCGCGCAATTGCCGGAAGGCGCGCGGCGTGTGGTTTCGGGCAAGCTTGAGCTATTTGATGGCATGGCTCAGATGG TCCACCCCGAACACATGCTGCCGCTAGAAGAAGCCGGGGACATTCCGGACTTTGAGCCGGTCTATCATCTGACACACGGC ATCACCCAAAAAACCATGTACAAGGCCGTCCAGAGCGCCCTTGCGCGGGTGCCGGATCTCACAGAGTGGATGGATCCCGC GCAAAAAACGAAACAGGGCTGGCCGGATTGGCACGCGGCGATTTCTGCCGCACATGCGCCCGCGACGCTGGAGGATCTAG GCGCACAGGCCCCGGCGCGCGCGCGCCTTGCCTATGACGAGCTTTTTGCGCACCAGCTTACACTTGCGATTGCCCGCTCG GTGGAGCGGGACCTGCCGGGACGGCGGTCAGTCGCGACGGGCACGCTGCAGAGAAAGGTGCTTGCCACATTGCCCTATCG CCCCACCGGGGCGCAGGGGCGAGCCATAGAAGAGATCACCGCCGATATGGGCTCTGAGCGGCGCATGAACCGTTTGCTGC AAGGCGACGTGGGAGCGGGGAAAACGCTGGTCGGTTTCATGGCGCTTCTGGTTGCGGTCGAGGCTGGCGGTCAGGGTGTG ATGATGGCGCCGACAGAAATCCTTGCGCGGCAACATCTTGAAGGGCTCAAGCCGCTTGCCGAAGACGCCGGTGTCGTTCT TGAGATCCTGACCGGACGCGACAAGGGCAAGGACCGTCGCGCCAAACTGGAGTCCCTCGCGCGGGGCGACATCCATATTC TTGTCGGCACTCATGCGGTGTTCCAGCAAGATGTCGTCTTTGACGATCTGCGCCTCGTGATCGTCGATGAACAGCACCGC TTTGGCGTGCGGCAACGCATGGAACTGGCTGAAAAAGGCAAGCGCGCGGATGTTCTTGTCATGACCGCGACGCCGATTCC GCGCTCGCTGGCGTTGACCCAATATGGCGATATGGAGGTCTCGATCCTCGATGAAAAACCGCCAGGACGCAAACCGATCA AGACTGCGATTCTGAGCACAGAGCGGATGTCCGAGGTTGTGGACCACCTGCGTCGTGCCATCGACGAGGGACGGCAGTGT TATTGGGTCTGCCCGCTGGTTGAGGAATCCGAGGTGATGGATCTGACCGCTGCGGACGAGCGGTTCAAACACCTGCGCGC GGTCTTGGGCGAGGAGGTGGTGGGGCTGGTGCATGGCCAAATGCCGCCAGCGGAAAAAGATGCCGCCATGCTCGCGTTTC AAGAAGGCCGCACCCGTGTTCTGGTGGCGACCACCGTGATCGAGGTCGGGGTCAATGTCCCCAACGCGTCGATCATGGTG ATCGAACGTGCCGAGATCTTTGGCCTTGCCCAACTGCACCAATTGCGGGGACGGGTGGGGCGCGGCGAGGCGCAGTCCAC CTGTTTGCTGATGTATCAGCCGCCCCTGACCGAAGGCGGACGCAAGCGGCTCGAGGTGCTGCGCGAGAGCGAAGATGGAT TTGTCATCGCCGAAACCGATCTGCAAATGCGCGGTGCCGGAGACGTCATCGGCACGGCACAATCTGGTTTGCCACGGTTC CATATCGCGGATCTCGAGCGTCAGTCGGATCTGATGGCAATCGCGCAAAGCGATGCGCGCGCATTGATGACCTCGGATCC CGATCTCTCCAGTGCGCGCGGGCGCGCAGCAAGAACGCTCTTGTGGTTGTTGCGTCAGGATGAGGCTATCCGGTTGATTT CAGTCGGCTAA Protein sequence : MSGRPEQLFPLFAELETLQGVGPKIAEHFAQLHITAPRDLLFSLPYSVVDRRRRETIRGLDLPTTATVEVTVGRHRPARN RGGAYRIDVTDQETEFQLVFFHGRSRYLTAQLPEGARRVVSGKLELFDGMAQMVHPEHMLPLEEAGDIPDFEPVYHLTHG ITQKTMYKAVQSALARVPDLTEWMDPAQKTKQGWPDWHAAISAAHAPATLEDLGAQAPARARLAYDELFAHQLTLAIARS VERDLPGRRSVATGTLQRKVLATLPYRPTGAQGRAIEEITADMGSERRMNRLLQGDVGAGKTLVGFMALLVAVEAGGQGV MMAPTEILARQHLEGLKPLAEDAGVVLEILTGRDKGKDRRAKLESLARGDIHILVGTHAVFQQDVVFDDLRLVIVDEQHR FGVRQRMELAEKGKRADVLVMTATPIPRSLALTQYGDMEVSILDEKPPGRKPIKTAILSTERMSEVVDHLRRAIDEGRQC YWVCPLVEESEVMDLTAADERFKHLRAVLGEEVVGLVHGQMPPAEKDAAMLAFQEGRTRVLVATTVIEVGVNVPNASIMV IERAEIFGLAQLHQLRGRVGRGEAQSTCLLMYQPPLTEGGRKRLEVLRESEDGFVIAETDLQMRGAGDVIGTAQSGLPRF HIADLERQSDLMAIAQSDARALMTSDPDLSSARGRAARTLLWLLRQDEAIRLISVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-151 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_1397 | YP_613392.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 4e-105 | 42 |
