Gene Information

Name : TM1040_1292 (TM1040_1292)
Accession : YP_613287.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3628
EC number : -
Position : 1387345 - 1387683 bp
Length : 339 bp
Strand : -
Note : PFAM: GPW/gp25: (1.3e-45); KEGG: syf:Synpcc7942_0739 hypothetical protein, ev=2e-25, 51% identity

DNA sequence :
ATGATTGGAATAGACGCATCCACTGGCAAACACATGTCTGATCTGGCGCATCTGCGTCAGTCGGTGCGTGACATCCTGAC
AACGCCGATTGGCACCCGTGTGATGCGCCGCGACTATGGAAGTCGCCTTTACCGCTTGGTTGATGCGCCAATGAATGACG
CAACTCGACTAGATATGATGGCAGCGACCTACGAAGCCATCGAAACGTGGGAGCCAAGGCTTCAACTGGAAAGTGTTTCG
CTCGAGGGTTCCGAACCTGGCGCAATCGTAATCGCTTTGGCGGGCCAGTATCTTCCAACAGGTGAGCCTGTGTTTCTCGA
AGGAATAGGGCTCAACTGA

Protein sequence :
MIGIDASTGKHMSDLAHLRQSVRDILTTPIGTRVMRRDYGSRLYRLVDAPMNDATRLDMMAATYEAIETWEPRLQLESVS
LEGSEPGAIVIALAGQYLPTGEPVFLEGIGLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4614 NP_458696.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-19 50
t4308 NP_807904.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-19 50
unnamed ABR13479.1 predicted baseplate Not tested PAGI-6 Protein 2e-16 48