Gene Information

Name : TM1040_1291 (TM1040_1291)
Accession : YP_613286.1
Strain : Ruegeria sp. TM1040
Genome accession: NC_008044
Putative virulence/resistance : Unknown
Product : baseplate J-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 1386446 - 1387345 bp
Length : 900 bp
Strand : -
Note : PFAM: Baseplate J-like protein: (2.3e-74); KEGG: pae:PA0618 probable bacteriophage protein, ev=9e-73, 48% identity

DNA sequence :
ATGGCTGGCGGCTTTGCATCAATCAATCTGTCTCAGTTGCCTGCGCCCGATGTGTTGCAGGCTATCGACTACGAAGTCGC
GCTCGCAGAAATGCTATCTGAGCTCAGGCAGAGAGATCCGGCTTTTGACGCTCTGGTCGAAAGTGACCCTGCCTACAAAA
TCCTCGAGATCGCGGCGTTTTATCGAACCTTGACTATTCAGCAGGGGAACGACGCAGCGCGAGCAGTGATGCCTGCCTAT
GCGACGGGTTCTGATCTTGACCATATTGCCGCCCGCTATGCTGTTGAACGATTGGTGATCGATCCCGGTGATCCTGAGGC
TCTCCCGCCAGTTCCCCCTGTCCTTGAGACCGACGACGCATTGCGCCGCCGAATGTTCCTCGCATTTGAAGGGCTGAGCA
CTGCGGGGCCGATGGGTGCCTATGTGTTCCATGCACTTGGCGCGGATCCGGACGTCGGGGATGCCAGCGTGCAAAGCCCC
GCGCCGGGCGAGGTGCTGGTCACGGTTCTTTCCCGGTCGGGCGATGGTGCTGCGCCTGCAACTCTGCTGACTGCTGTTGA
TGCTGCCTTGAACAAGGATGATGTGCGCCCGCTTACGGATCTCGTGACTGTCCAAGGGGCCGCAATCATCGGATATACCA
TCGAGGCGGTTCTTACTGTCTTACCCGGACCCGATAGTGCGGTTGTGCGAGACGCGGCTCAACGCGCAGCACTAGAGTAT
GCAAGCCAGCAGCACCGTATCGGGGCAGATATTACCCTTTCGGGGCTTTATGCTGCACTTCATCAGCCAGGAGTGCAGAA
CGTCGCGCTGATCAGTCCTGCAGCAGATATTCTGGTAGATGCAAGCGAGGCGGCATTCTGCTCTGCTGTTTCAGTTAGCA
TTGGGGGCACCAATGCCTGA

Protein sequence :
MAGGFASINLSQLPAPDVLQAIDYEVALAEMLSELRQRDPAFDALVESDPAYKILEIAAFYRTLTIQQGNDAARAVMPAY
ATGSDLDHIAARYAVERLVIDPGDPEALPPVPPVLETDDALRRRMFLAFEGLSTAGPMGAYVFHALGADPDVGDASVQSP
APGEVLVTVLSRSGDGAAPATLLTAVDAALNKDDVRPLTDLVTVQGAAIIGYTIEAVLTVLPGPDSAVVRDAAQRAALEY
ASQQHRIGADITLSGLYAALHQPGVQNVALISPAADILVDASEAAFCSAVSVSIGGTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 8e-49 47
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 8e-49 47
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 1e-38 45