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Name : TM1040_0130 (TM1040_0130) Accession : YP_612125.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 137814 - 140432 bp Length : 2619 bp Strand : + Note : PFAM: AAA ATPase, central region: (8e-12) Clp, N terminal: (2.9e-07) ATPase associated with various cellular activities, AAA_5: (2.3e-05) ATPase AAA-2: (4.2e-108); SMART: ATPase: (1.5e-14); KEGG: sil:SPO3276 ATP-dependent Clp protease, ATP-binding subunit DNA sequence : ATGGACTTGAACAAGTTCACTGAACGGGCGCGTGGTTTTGTGCAGGCGTCCCAGACGATTGCGTTGCGTGAAGGCCACCA GCGCCTGACACCGGAACATATCCTGAAAGCATTGCTCGACGACGATCAAGGCATGGCGTCGAACCTGATTGCGCACGCGG GCGGGAACATCGCGCGTGTGAGCGAGGCAGTAGAAGCCGCGATCGGCAAGTTGCCGAAGGTTTCTGGCGATGCTGGTCAG ATCTATCTGGACGGGCAAACCGCCAAGGTTCTGGATGAAGCGGCCAAGGTGGCCGAAAAAGCGGGCGACAGCTTTGTCCC GGTCGAGCGACTGCTGACAGCGCTTGCCCTCGTGAAATCCAAGGCAAAGGATGCGCTGGACGCAGGTGGCGTGACGGCGC AGAAGCTCAATGAGGCGATCAACGACGTACGCAAGGGGCGCACGGCGGATACCGCAACCGCAGAGGATACTTATGAGGCG CTGAAGAAGTTCACCCTCGACCTCACGGAGCGTGCGAGAGAGGGCAAGATCGACCCGATCATTGGCCGCGATGACGAAAT TCGCCGCGCCATGCAGGTTCTGTCGCGTCGCACCAAGAACAACCCTGTGCTGATCGGCGAGCCGGGCGTGGGTAAAACCG CGATTGCCGAAGGCATGGCTTTGCGGATCGTCAATGGCGACGTGCCCGAGAGCCTCAAGGACAAGCGTCTGCTAGCGCTC GACATGGGCGCGCTTATTGCGGGTGCGAAATATCGCGGTGAGTTCGAGGAACGCCTCAAGGGCATCCTCAATGAGGTGAC CGATGCGGCGGGCGAAATCATTCTGTTTATCGACGAGATGCATACCCTTGTAGGGGCAGGCAAATCCGATGGCGCGATGG ATGCGGCCAACCTCATCAAGCCGGCACTTGCTCGCGGTGAGCTGCACTGTATCGGCGCAACCACGCTCGATGAGTATCGT AAATACGTAGAGAAGGACGCAGCCCTGGCCCGCCGCTTCCAGCCTGTCATGGTCACGGAGCCGACGGTGGAAGACACGAT TTCCATCCTGCGTGGCATCAAGGAAAAGTACGAGCTGCACCACGGTGTCCGCATTGCGGATGCGGCGCTGGTGTCTGCCG CTACGCTCTCGAACCGCTATATCACCGACCGGTTCCTGCCCGACAAGGCGATTGACCTTATGGACGAGGCGGCATCGCGC CTGCGGATGGAGGTGGACTCCAAACCCGAAGAGCTCGACGCGCTGGATCGGCAGATCCTGCAGATGCAGATCGAAGAAGA AGCGCTGAAGCTCGAGGATGATGCGGCGTCGAAGGACCGGTTGGAGCATCTCCAGAAGGAACTGGCAGACCTGCAGGAGC GTTCGCGCGAAATGACCGCGCAATGGCAGTCCGAGCGTGACAAGCTCGCCTCTGCGCGTGATCTGAAAGAGCAGCTTGAT CGCGCACGTGCCGAACTCGACATCGCCAAACGCGAGGGGAATCTCGCCAAGGCGGGTGAGCTGTCTTATGGCGTCATTCC GGGGTTGGAAAAGCAGCTCTCTGAGGCCGAACAGAAAGAAGAGCAGGGCCTGATGGTCGAGGAAGCGGTGCGCCCGGAGC AGATTGCAGCTGTGGTGGAACGCTGGACCGGTATTCCGACCTCAAAGATGTTGGAGGGCGAGCGCGAGAAGCTCTTGCGG ATGGAAGATGGCCTGCACAAGCGCGTCATTGGTCAGAACGCCGCCGTGACGGCCGTGGCTAACGCGGTGCGTCGGGCGCG CGCGGGGCTCAATGATGAGAACCGTCCGCTGGGGTCCTTCCTATTCCTTGGGCCGACCGGCGTGGGGAAAACCGAGCTCA CCAAAGCTGTGGCCGAGTTCCTCTTTGACAATGACAGCGCGATGGTACGCATCGACATGTCGGAGTTCATGGAGAAACAC GCAGTCGCACGTCTGATCGGTGCCCCTCCGGGCTATGTCGGGTATGACGAGGGCGGCGTGCTCACCGAGGCGGTGCGGCG CAGACCTTATCAGGTGGTTCTGTTTGACGAGGTCGAAAAGGCCCACCCGGACGTGTTCAACGTGCTCTTGCAGGTGCTCG ATGATGGCGTGCTGACCGATGGTCAGGGCCGGACCGTGGACTTCAAGCAGACGCTGATCATCCTGACATCAAACCTCGGA GCGCAGGCGCTGAGTCAGCTGCCAGATGGCGCGGATGCAGCAGATGCCAAACGCGACGTGATGGATGCGGTGCGGGCACA CTTCCGGCCCGAGTTCCTGAACCGTCTGGATGAGACCGTGATCTTTGACCGTCTGGGACGGCACGATATGGACGGTATCG TCGAAATCCAGCTTGGGCGTCTCGCCAAGCGTCTGGCGCAACGCAAAATCACGCTGGAGCTGGATGAGGGGGCAAAGACC TGGCTCGCAGATGAGGGCTACGACCCGGTGTTCGGGGCGCGTCCGCTCAAACGCGTGATCCAGCGCGCCTTGCAAAACCC GTTGGCCGAGGCCCTGCTGGCTGGCGACATCAAGGACGGTGAAATCGTTCCCGTGTCTGCCGGGGCTGAGGGGCTGGTGA TCGGGGATCGCGTCGGCAGCTCCGATCGTCCGCTGCCGGATGATGCCGTGGTGCATTGA Protein sequence : MDLNKFTERARGFVQASQTIALREGHQRLTPEHILKALLDDDQGMASNLIAHAGGNIARVSEAVEAAIGKLPKVSGDAGQ IYLDGQTAKVLDEAAKVAEKAGDSFVPVERLLTALALVKSKAKDALDAGGVTAQKLNEAINDVRKGRTADTATAEDTYEA LKKFTLDLTERAREGKIDPIIGRDDEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLKDKRLLAL DMGALIAGAKYRGEFEERLKGILNEVTDAAGEIILFIDEMHTLVGAGKSDGAMDAANLIKPALARGELHCIGATTLDEYR KYVEKDAALARRFQPVMVTEPTVEDTISILRGIKEKYELHHGVRIADAALVSAATLSNRYITDRFLPDKAIDLMDEAASR LRMEVDSKPEELDALDRQILQMQIEEEALKLEDDAASKDRLEHLQKELADLQERSREMTAQWQSERDKLASARDLKEQLD RARAELDIAKREGNLAKAGELSYGVIPGLEKQLSEAEQKEEQGLMVEEAVRPEQIAAVVERWTGIPTSKMLEGEREKLLR MEDGLHKRVIGQNAAVTAVANAVRRARAGLNDENRPLGSFLFLGPTGVGKTELTKAVAEFLFDNDSAMVRIDMSEFMEKH AVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIILTSNLG AQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRLDETVIFDRLGRHDMDGIVEIQLGRLAKRLAQRKITLELDEGAKT WLADEGYDPVFGARPLKRVIQRALQNPLAEALLAGDIKDGEIVPVSAGAEGLVIGDRVGSSDRPLPDDAVVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-102 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 9e-104 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 7e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_0130 | YP_612125.1 | ATPase AAA | VFG2076 | Protein | 6e-117 | 45 |
| TM1040_0130 | YP_612125.1 | ATPase AAA | VFG2084 | Protein | 6e-107 | 42 |
