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Name : TM1040_1113 (TM1040_1113) Accession : YP_613108.1 Strain : Ruegeria sp. TM1040 Genome accession: NC_008044 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1194349 - 1196370 bp Length : 2022 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : GTGGATCTGACAGCCCTGCGCTCTGAAAACCCCGATCATTGGAACAAAGCCGCCGCCATCCGCGCCCTGACGCTGGATGC GGTTGCGGGTGCAAACTCCGGCCACTCCGGCATGCCGATTGGCATGGCCGATGTCGCAACCGTGCTGTTTGAAAAGCACA TGAAGTTCGACGTCTCCGCCCCCAAATGGGCGGACCGCGATCGCTTCATCCTGTCGGCCGGCCACGGCTCCATGCTGATC TATTCGCTGCTCTACCTCATGGGCGACGCACAGGTCACGCTCGAGCAGATCAAGAACTTCCGTCAGTCCGGCGCGCTCAC GGCGGGCCACCCGGAGAACTTTCTTCTGGACGCGGTCGAAGTCACCACCGGCCCGCTTGGCCAGGGGATCTCGAACGCTG TCGGCTTTGCCATGGCCGAGGAAAGCCTGCGCGCCCAGTATGGCAAGAAGGTTGTCGATCACTACACCTATGTCATCGCG GGCGACGGCTGCCTCATGGAAGGCGTGAGCCAGGAGGCAATCGGCCTTGCCGGGCGTCACCAGCTGGGCAAGCTCGTGGT GTTCTGGGACAACAACAACATCACCATCGACGGCACCGTTGATCTCTCTGATCGCACCAATCAGGTGCAGCGCTTCAAAG CGTCCGGTTGGCATGTGCAGGAAATCGACGGCCATAACCCGGCCGAGATCGACGCCGCCATCGAGGCCGCGAAGAAGACC AAGAAACCGTCGATGATCGCCTGCAAAACCCATATCGCTCTGGGTCACGCTGCGCAGGATACCTCCAAAGGCCACGGCGC TCTGACCGACGCCGATCAGCTCAAAGCCGCCAAGGAAGCCTATGGCTGGACCGGTGGCGCCTATGAGGTGCCCGCCGAGA TCAAATCCCAGTGGGAAGCGATCGGCCAGCGCGGTGCTACGGCGCGCGCTGAATGGGAAGCGCGTTTTGCCGAGATTTCC AAGCAGAAACAGGACCGGTTCAACCGGGCCTTTGCCCTTGAGGCGCCGAAGAAGCTCTCCGCGACCGTGAAGGCGCTGAA AAAGCAGATCTCGGAAACCAAACCCAAGGTGGCAACCCGCAAGGCGTCGGAAATGGCGCTTGAGGTCATCAACCCGATCA TGCCCGAAACCATTGGCGGCTCGGCGGATCTCACCGGCTCCAACAACACCAAGACCGGCGATCTTGGGGTGTTTGACACC GACAACCGCAAGGGCCGCTATGTCTATTGGGGCATCCGCGAGCATGGTATGGCGGCAGCGATGAACGGCATGGCGCTGCA TGGCGGTATTCGCCCCTATGGCGGGACGTTCTTCTGCTTTACCGATTATGCGCGTCCGGCCATGCGTCTGGCGGCCCTGT CGAAGATCCCGACGGTCTTTGTGATGACCCACGATTCCATCGGTGTGGGCGAAGATGGCCCGACCCACCAGCCGGTCGAG CATCTCGCGATCTGTCGCGCGACCCCGAACACCTATACCTTCCGCCCTGCCGACGCGGTGGAAACCGCAGAAGCCTGGGA AATCGCGCTGACGGCCAAGGAAACCCCGTCGGTGATCGCGCTCACGCGTCAGGGCCTGCCCACCGTGCGCACCGAGCACA AGCTGGCCAACCTCACCGAGAAAGGCGCCTATGTGCTGGCCGAGGCCGAGAGCAAGCGTCAGGTGATCCTGATGGCTTCC GGCTCCGAAGTGTCGGTTGCGATGGCTGCAAAAGACATCCTCGAGGGTCAAGGCATCGGCACCCGCGTGGTCTCTGTGCC CTGCATGGAGCTGTTCCACGCGCAGGACGAAGCCTACCGCCGCAAGGTTCTGCCCGCAGGTCCCGTGCGCGTGGCCATCG AGGCCGCCGTGCGCGATGGCGGCTGGGATCGCCTCTTGCTGGGGGAACGCGGCCAGGAGAAGAAGGCAGGCTTTGTCGGC ATGCAGGGCTTTGGTGCTTCTGCCCCGGCGGGTGAGCTCTTTGAGAAATTCGGCATTACCGCCGAAGGCACCGTCGCCAA GGTCAAAGAGCTGTTGGGCTAA Protein sequence : MDLTALRSENPDHWNKAAAIRALTLDAVAGANSGHSGMPIGMADVATVLFEKHMKFDVSAPKWADRDRFILSAGHGSMLI YSLLYLMGDAQVTLEQIKNFRQSGALTAGHPENFLLDAVEVTTGPLGQGISNAVGFAMAEESLRAQYGKKVVDHYTYVIA GDGCLMEGVSQEAIGLAGRHQLGKLVVFWDNNNITIDGTVDLSDRTNQVQRFKASGWHVQEIDGHNPAEIDAAIEAAKKT KKPSMIACKTHIALGHAAQDTSKGHGALTDADQLKAAKEAYGWTGGAYEVPAEIKSQWEAIGQRGATARAEWEARFAEIS KQKQDRFNRAFALEAPKKLSATVKALKKQISETKPKVATRKASEMALEVINPIMPETIGGSADLTGSNNTKTGDLGVFDT DNRKGRYVYWGIREHGMAAAMNGMALHGGIRPYGGTFFCFTDYARPAMRLAALSKIPTVFVMTHDSIGVGEDGPTHQPVE HLAICRATPNTYTFRPADAVETAEAWEIALTAKETPSVIALTRQGLPTVRTEHKLANLTEKGAYVLAEAESKRQVILMAS GSEVSVAMAAKDILEGQGIGTRVVSVPCMELFHAQDEAYRRKVLPAGPVRVAIEAAVRDGGWDRLLLGERGQEKKAGFVG MQGFGASAPAGELFEKFGITAEGTVAKVKELLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 8e-125 | 48 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 6e-125 | 46 |
