Gene Information

Name : TM1040_3126 (TM1040_3126)
Accession : YP_611362.1
Strain :
Genome accession: NC_008043
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 100360 - 101157 bp
Length : 798 bp
Strand : -
Note : PFAM: Integrase, catalytic region: (4.6e-37); KEGG: mlo:mll6088 transposase, ev=1e-117, 75% identity

DNA sequence : 
ATGCGGGCGGATTGGCAGGTGTCGATCCGCCGGGCCTGCGAGGTGATCCGGTTCGATCCGAGAACCTATCGCTACAAATC
CCGCCGGCCTGGGCAGGCCGCTTTGGAACAGCGGATACGAGAGATTTGCCAGACGCGCGTGCGCTTCGGCTACAGGCGCG
TGCATGTGCTGCTGCGCCGGGAGGGCTGGGAGATCAACGCCAAGAAGACCTATCGCATTTACAAGGAGTTGGGTATGCAA
CTTCGGAGCAAGACACCTAAGCGCCGGGTGAAGGCCAAGCTGCGGGATGACCGCAAGGAGGCTGTCAGCCCCAATGACGT
CTGGGCTATGGACTTTGTTCATGATCAGCTGGCTACAGGCTGGAAACTTCGGGTTCTGACGGTCGTCGACACCTTCTCAC
GCTATGTCCCGGTGCTTGATGCTCGGTTCACATATCGCGGGGAGGACGTGGTCGCGACGCTTGAGCAAGTATGCAAGCGC
ACCGGCTACCCAGCCACCATCCGTGTTGACCAGGGCAGCGAGTTCATCTCCAAGGATATGGACCTTTGGGCCTATGCCAA
CGACGTGACATTGGACTTCTCCCGTCCGGGCAAACCTACCGACAACGCCTTCATCGAGGCGTTCAATGGCCGGTTCCGGG
CGGAGTGCCTGAACGCGCACTGGTTCATGAGCCTTGAAGATGCAGCCGAAAAGTTGGAGGCTTGGCGTAGAGACTACAAT
GAAGAACGCCCGCACGGGGCTATCGGGAACAAGGTCCCGGCAGACCTGATGAAATCAGTTCACGACACCAGCCCGTGA

Protein sequence : 
MRADWQVSIRRACEVIRFDPRTYRYKSRRPGQAALEQRIREICQTRVRFGYRRVHVLLRREGWEINAKKTYRIYKELGMQ
LRSKTPKRRVKAKLRDDRKEAVSPNDVWAMDFVHDQLATGWKLRVLTVVDTFSRYVPVLDARFTYRGEDVVATLEQVCKR
TGYPATIRVDQGSEFISKDMDLWAYANDVTLDFSRPGKPTDNAFIEAFNGRFRAECLNAHWFMSLEDAAEKLEAWRRDYN
EERPHGAIGNKVPADLMKSVHDTSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-47 48
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-54 46
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 4e-41 46
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 1e-31 42