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Name : TM1040_3434 (TM1040_3434) Accession : YP_611668.1 Strain : Genome accession: NC_008043 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 458378 - 459988 bp Length : 1611 bp Strand : - Note : PFAM: ABC transporter related: (4.5e-61) Oligopeptide/dipeptide ABC transporter-like: (9.6e-05); SMART: ATPase: (8.4e-19); KEGG: sil:SPO0098 peptide/opine/nickel uptake family ABC transporter, ATP-binding protein, ev=0.0, 69% identity DNA sequence : ATGAGCCTTCTGGATATTTCCAACCTCTCGCTCTCGATCGGGGCGCTGCCGATCCTGCGGAATGTGACCCTGTCGATAGC GGCAGGCGAGATCCTCGCGGTGACGGGCGAGAGCGGATCTGGCAAATCGATGACGGCTTTTTCCGTCATGCGCCTGTTGC CGCAGGCTGCCAAGATTGACGGCGCGATTTACCTTGAGGACGAAAACCTCTGCGCCCTCTCCGAAGACGAGATGTGCCAG CGGCGCGGGCGTGACATCGGTATGGTGTTTCAAGAGCCCATGACGGCGCTCAACCCGGTGATGACCATCGGGGCGCAGGT GATGGAGACGATCCTCTTGCACACCGACACCGCCGAAGCCGACGCCAAGGCCGAGGCCGCGCGCGTGTTGACCCGGGTCG GCCTGCCGCCGGAGCGTTTCCCGATGGATCGCTACCCGCACGAGCTCTCTGGCGGACAACGTCAGCGCGTTGTGATCGCG ATGGCGATTGCGCTCAGGCCCAAGCTCTTGATCGCGGATGAACCCACAACCGCGCTGGATGTGACTACACAGGCGCAGAT CCTTGATCTCTTGCGGGACCTGGTGCGCGAATACGGGATGGGGCTGCTCATTATCACCCATGACCTTGCTGTTGTGGCCG ATCTTGCCGATCGGATCGTGGTGATGCGCAAGGGTGAGGTGGTCGAGCGCGGCCCGACCCTGAGCGTGCTCACCCATCAA CGCCACCCCTATACGCGCATGCTGTTTGAGGCGTCCGCTCACAAGGTTGCGCTGCCTGCCGCGCCCGAGGCCCCTGCCCC GCTGCTGGAGGTGCGAGGCGCCGTGCGCGACTATGCAACGCCTCGCAAAGGCTGGCTGGGCAAACCAGGCACGTTTCGCG CCGTCAACGATGTGAGCTTCACGCTTCACAAGGGCGAGCGTCTGGGCCTTGTGGGCGAGTCCGGATGCGGCAAATCCACC CTGACCCGGGCCATTCTGGGCCTCGAAGGGCTGCAAGGCGGAGAGCTGCTGCTGAACGGTCAGCCCCTGTCGCAACAGCG CAGCGCCGCCCAGCGGCAAGCGATGCAGGTGGTGTTTCAGGACCCTTATGGCAGTTTCAATCCGCGCCACCGGGTTGAGC GGCTGGTGACGGAACCGTTTCATCTATCGCCGGACGCCGCAACCGGCCAAGAGCGGCGCGACCTGGTGGGACAGGTGCTG GAGGACGTGGGGCTCAAGGCTTCGGATGCAAACAAGTATCCGCATCAGTTTTCCGGTGGGCAACGTCAGCGCATCGCCAT TGCGCGCGCGCTGATTACGCGGCCCGAGCTCATCATCTTTGACGAGGCGGTCTCGGCGCTCGATGTCTCGGTGCGCGCCC GTATTCTCGACCTGATTGCCGAGCTCTGCGAGGCCTATGGGCTCACCTATCTCTTTATCAGCCACGATCTGAGCGTGGTG CGCGAGGTCTGCGACCGGGTGCTGGTGATGCAGAAGGGCGAAATCGTCGAAGAAGGCCCCGTCGACGACGTCTTTACCGC GCCACAGCACAGCTACACGCAGAAACTTCTGGCGGCGGCGCCGGTGCTGCCGGACATCACGCCAACCGAGCCCGTTGAGG CCCCCGCATGA Protein sequence : MSLLDISNLSLSIGALPILRNVTLSIAAGEILAVTGESGSGKSMTAFSVMRLLPQAAKIDGAIYLEDENLCALSEDEMCQ RRGRDIGMVFQEPMTALNPVMTIGAQVMETILLHTDTAEADAKAEAARVLTRVGLPPERFPMDRYPHELSGGQRQRVVIA MAIALRPKLLIADEPTTALDVTTQAQILDLLRDLVREYGMGLLIITHDLAVVADLADRIVVMRKGEVVERGPTLSVLTHQ RHPYTRMLFEASAHKVALPAAPEAPAPLLEVRGAVRDYATPRKGWLGKPGTFRAVNDVSFTLHKGERLGLVGESGCGKST LTRAILGLEGLQGGELLLNGQPLSQQRSAAQRQAMQVVFQDPYGSFNPRHRVERLVTEPFHLSPDAATGQERRDLVGQVL EDVGLKASDANKYPHQFSGGQRQRIAIARALITRPELIIFDEAVSALDVSVRARILDLIAELCEAYGLTYLFISHDLSVV REVCDRVLVMQKGEIVEEGPVDDVFTAPQHSYTQKLLAAAPVLPDITPTEPVEAPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-86 | 46 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 6e-86 | 46 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-86 | 46 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 6e-86 | 46 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-86 | 42 |
