Gene Information

Name : TM1040_3330 (TM1040_3330)
Accession : YP_611564.1
Strain :
Genome accession: NC_008043
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 340248 - 340973 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter related: (2.1e-69); SMART: ATPase: (4.6e-21); KEGG: sdy:SDY_2618 ATP-binding component of sulfate permease A protein, ev=3e-69, 57% identity

DNA sequence :
ATGACGTTCGAAGCCAGTAATATTCATAAGAGTTTCAATGGCACCGAGGTGCTAAAGGGCGTCTCGCTTGCGATGAAAAA
GGGCGAGTTCATAGCGCTCCTCGGCGCTTCCGGCTCGGGAAAGACCACTCTGTTGAATATCATAGCGGGTCTGCAGCAGG
CGGATCGGGGGCAATTGCATCTTGATGGTCGCGACATTACCGGGCTGGCGGCGGGCAAGCGCCGCTTTGGCATGGTGTTT
CAAAACTACGCGTTGTTTCGCCACATGACGGTGGCCGATAACATCGCCTTCGGTCTGCGGGTTTTGCCGCGTCGCGCGCG
CCCTGGTCGTGCAGCGCGTGACGCCAAGGTCTCGGAGCTTCTGGAGATGATCGGCCTTCAGGATCTTGGCGACCGTTTTC
CGCAGCAACTCTCTGGCGGGCAGCGCCAGCGCGTGGCGATGGCGCGGGCCCTGGCGATCAATCCGCAGCTTCTGTTGATG
GATGAGCCCTTTAGTGCACTGGATGCGCAGGTGCGCCGGTCTCTGCGCAGCTCTGTGCGCACATTGCAGCAAAAGGTTGG
GGTGGGCGCGATCATGGTGACGCATGATCAGGCCGAAGCCTGGGATCTTGCGGACCGCGTGGCCGTGATGGATCAGGGGC
AGATCGTGCAGTTCGACACCCCGGATGCGCTGCGTGACCGGCCGGCGACTGGGGCCGTAAGAGAGCTACTGCAAGGCGCG
GCCTGA

Protein sequence :
MTFEASNIHKSFNGTEVLKGVSLAMKKGEFIALLGASGSGKTTLLNIIAGLQQADRGQLHLDGRDITGLAAGKRRFGMVF
QNYALFRHMTVADNIAFGLRVLPRRARPGRAARDAKVSELLEMIGLQDLGDRFPQQLSGGQRQRVAMARALAINPQLLLM
DEPFSALDAQVRRSLRSSVRTLQQKVGVGAIMVTHDQAEAWDLADRVAVMDQGQIVQFDTPDALRDRPATGAVRELLQGA
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TM1040_3330 YP_611564.1 ABC transporter NC_008702.1.4606598. Protein 2e-20 42