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Name : TM1040_3868 (TM1040_3868) Accession : YP_611260.1 Strain : Genome accession: NC_008042 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter- DctM subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 122123 - 123424 bp Length : 1302 bp Strand : - Note : TIGRFAM: TRAP dicarboxylate transporter- DctM subunit: (1.3e-178); PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit: (5.2e-157); KEGG: vpa:VPA1704 putative integral membrane protein, possible transporter, ev=1e-170, 69% identity DNA sequence : ATGACGACAGCTATTTTTCTTCTCTTTGGCAGTTTTGTCGTGCTGATGGCGCTGGGTGTGCCGATTGCGTTTGCTATTGG TCTTGCGACCACCGCGACGTTCTTGTTGTTTATGGGAGTGGACCAATCCCTGTTTATCGTTGCGCAGCAAATGGCGTCAG GGTTGGACAGCTTTACGCTTCTCGCCATTCCATTTTTTATCTTGGCGGGGAACATCATGAACCGCGGTGGGATCGCCATG CGGTTGATCAACTTCGCCAAAGTGCTGGGCGGTCGGCTTCCTGGCGCGCTGGCCCATTGCAACGTGATTGCCAACATGAT GTTCGGATCTATTTCCGGATCTGCTGTGGCCTCTGCTGCGGCAGTGGGCGGCGTGATGGCTCCTTTGCAAAAGAAAGAGG GTTACGATCCTGCTTTTTCTGCTGCGGTCAATATTGCCTCCTGTCCGACAGGCCTGTTGATACCGCCGTCAGCAACGTTG ATCGTTTACTCCTTGATCACTGGCGGAACATCTATAGCCGCGTTGTTCGTAGCTGGATATTTGCCCGGCATCCTGATGGG GCTGGGATTGATGATCGTGGCTGGTGTGATCGCTAAGCGGCGCGGCTATCCTGTTGCGCCCCGTCCCGCACTCAGCGAGG TCATGGTGGCCGCGCGCGATGCAGCCTTGCCTCTGGGCCTGATCGTGATCGTGATGGGCGGCATCATCTCGGGTGTCTTC ACGGCAACCGAGGCCTCGGCCGCAGCAGTGCTCTACACGCTGGTTTTGGCATTGGTCTGGTACCGCGAAATCACGATTAA GGATTTGCCCGCAATATTGATAGAAAGCGCGGTCACTACTTCAGTGGTTCTATTGATGATCGGCGCGTCCATCGCGATGA GCCGTGTCATGGCCTTTGGCGGCATCCCTTTTGCGATCTCAGATTTCTTGTTGGGTCTATCTGATAACCCGATTGCTATC CTCCTGGCGATCAACGTGGCGCTGCTGGTCGTCGGGACCTTTATGGATATGACACCTGCGCTCTTAATCTTCACGCCAAT TTTCATGCCAGTTGTCAAAGGCCTTGGTATGGACCCTGTGCATTTTGGCATCGTGATGACGCTAAACCTCTGCATTGGTA TCTGTACGCCGCCTGTGGGTTCAGCCCTGTTTGTGGGCTGCTCTGTCGGGGGCACTTCTATTGCCAAAGTCATCCGCCCA CTTCTGCCCTTTTATGCGGTGTTGTTCGGTCTCCTGATGCTGGTCACTTATGTGCCTGACATCAGCCTCTTCCTGCCGCG CCTTCTATTGGGATATCAGTAA Protein sequence : MTTAIFLLFGSFVVLMALGVPIAFAIGLATTATFLLFMGVDQSLFIVAQQMASGLDSFTLLAIPFFILAGNIMNRGGIAM RLINFAKVLGGRLPGALAHCNVIANMMFGSISGSAVASAAAVGGVMAPLQKKEGYDPAFSAAVNIASCPTGLLIPPSATL IVYSLITGGTSIAALFVAGYLPGILMGLGLMIVAGVIAKRRGYPVAPRPALSEVMVAARDAALPLGLIVIVMGGIISGVF TATEASAAAVLYTLVLALVWYREITIKDLPAILIESAVTTSVVLLMIGASIAMSRVMAFGGIPFAISDFLLGLSDNPIAI LLAINVALLVVGTFMDMTPALLIFTPIFMPVVKGLGMDPVHFGIVMTLNLCIGICTPPVGSALFVGCSVGGTSIAKVIRP LLPFYAVLFGLLMLVTYVPDISLFLPRLLLGYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 6e-43 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 6e-43 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 4e-43 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TM1040_3868 | YP_611260.1 | TRAP dicarboxylate transporter- DctM subunit | VFG1110 | Protein | 2e-43 | 41 |
