Gene Information

Name : PSEEN0943 (PSEEN0943)
Accession : YP_606663.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 984334 - 985005 bp
Length : 672 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator

DNA sequence : 
ATGCGTGTGCTGATCATCGAAGACGAAGAGAAAACCGCCGACTACCTGCATCGCGGTCTGAGCGAACAGGGCTTCACCGT
CGACCTGGCCCGTGACGGCATCGACGGCCTGCACCTGGCGCTGGAGGGCGACTACGCGGTGATCGTCCTCGACGTGATGC
TGCCAGGCCTGGACGGTTACGGCGTACTTCGCGCACTGCGGGCGCGCAAGCAGACGCCAGTGATCATGCTCACCGCCCGC
GAGCGGGTCGAGGACCGCATCCATGGGTTGCGCGAAGGCGCCGACGATTATCTGGGCAAGCCGTTCTCGTTCCTCGAACT
GGTGGCCCGCCTGCAGGCGCTGACCCGGCGCAGCGCCATTCACGAACCCTTGCAGATTCAGGTGGCCGACCTGTGGATCG
ACCTGATGGCACGCAAGGCCACCCGTGCGGGGCAGCGCCTGGACCTGACCGCCAAGGAGTTCTCGCTGCTCAGTGTGCTG
GCGCGGCGCCAGGGCGAGATCTTGTCCAAGACAGCTATTGCCGAGCTGGTCTGGGACATCAACTTCGACAGCGACGCCAA
TGTGGTCGAGGTGGCGATCAAGCGCCTGCGGGCGAAGCTCGACGGGCCGTTCGACAACAAGCTGCTGCATACCATTCGAG
GCATGGGTTATGTCCTGGAGCACCGTGGGTAG

Protein sequence : 
MRVLIIEDEEKTADYLHRGLSEQGFTVDLARDGIDGLHLALEGDYAVIVLDVMLPGLDGYGVLRALRARKQTPVIMLTAR
ERVEDRIHGLREGADDYLGKPFSFLELVARLQALTRRSAIHEPLQIQVADLWIDLMARKATRAGQRLDLTAKEFSLLSVL
ARRQGEILSKTAIAELVWDINFDSDANVVEVAIKRLRAKLDGPFDNKLLHTIRGMGYVLEHRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-55 56
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-55 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator BAC0125 Protein 4e-62 57
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator BAC0197 Protein 3e-58 57
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator BAC0083 Protein 2e-57 56
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator BAC0111 Protein 2e-58 55
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator BAC0638 Protein 4e-50 55
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator BAC0308 Protein 6e-54 50
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator BAC0347 Protein 1e-51 50
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator CP000675.2.gene1535. Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator VFG0596 Protein 1e-55 56
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator VFG1389 Protein 1e-37 48
PSEEN0943 YP_606663.1 DNA-binding heavy metal response regulator VFG1386 Protein 2e-34 43