Gene Information

Name : ribD (PSEEN0588)
Accession : YP_606346.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 601526 - 602653 bp
Length : 1128 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme

DNA sequence :
ATGTCCAGCCAAGCCATCCTCGACGCCCACTACATGGCCCGGGCCGTGGAACTGGCCCGCAAGGGCCTCTACACGACCCA
CCCCAACCCACGCGTCGGTTGCGTGATCGTGCGCGATGGCGAGGTGGTCGGCGAAGGCTGGCATGTGCGCGCCGGCGAGC
CCCACGCCGAGGTGCATGCGCTGCGCCAGGCCGGCGAGCTTGCCCGTGGCGCCTGTGCCTATGTCACCTTAGAGCCGTGC
AGCCACCATGGCCGCACCCCGCCGTGCGCCGAGGCGCTGGTCAAGGCCGGTGTGGCACGGGTGGTGGCGGCCATGCAGGA
CCCCAACCCGCAAGTGGCCGGCAATGGCCTGCGGCGCCTGCGCGAGGCCGGCATCGAGGTCGCCAGCGGCGTGCTCGAAG
CCGAGGCGCGGGCGCTGAACCCCGGCTTTCTCAAGCGCATGGAGCATGGCCTGCCGTTCGTCCGCGCCAAGTTGGCCATG
AGCCTGGACGGCCGCACCGCCATGGCCAGCGGCGAGAGCCAGTGGATCACCGGCCCTGCCGCCCGCGCCGCTGTGCAGCG
CCTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCCAGAGCGTGTTGCAGGACAACGCCCGGATGACCGTGCGTGGCG
AAGAACTCGGGCTGGACAGCGCGCTCACTACCCTGGCCCTGTCGCGCCCGCCGCTGCGGGTGCTGGTCGACGGGCGCCTG
CGTCTGCCGCTGGACGCGCCGTTCTTCCAGGCCGGCCCGGCGCTGGTGGTCACTGCCGCGGGCGACGACCCGCGCTACGC
CGCCGCCGGCCATGAACTGCTCAACCTGCCGGGCGACGATGACCAGGTCGACCTGCCCGCGCTGTTGCGTTGCCTGGCCG
AACGCGGCGTCAACGAGATCCTGCTGGAGGCCGGTGCCGGCCTGGTCGGCGCCTTCGCCCGCCAGGGCCTGGTCGACGAG
TTCCAGCTGTTCGTCGCCGGCACCTTCCTCGGCTCCGAGGCCCGCCCGCTGCTGGACTGGCCCTTGTCGAAAATGAGCGA
GGCGCCACGGCTGAAAATCACCGAAATGCGCGCGGTCGGCGATGACTGGCGAGTCACTGCCATCCTCTTGCCGGCCCCCG
GCGTATAA

Protein sequence :
MSSQAILDAHYMARAVELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGELARGACAYVTLEPC
SHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGNGLRRLREAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLAM
SLDGRTAMASGESQWITGPAARAAVQRLRARSSVVLTSAQSVLQDNARMTVRGEELGLDSALTTLALSRPPLRVLVDGRL
RLPLDAPFFQAGPALVVTAAGDDPRYAAAGHELLNLPGDDDQVDLPALLRCLAERGVNEILLEAGAGLVGAFARQGLVDE
FQLFVAGTFLGSEARPLLDWPLSKMSEAPRLKITEMRAVGDDWRVTAILLPAPGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 9e-60 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 9e-60 48