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Name : rph (PSEEN5439) Accession : YP_610833.2 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 5756929 - 5757651 bp Length : 723 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAAACGTCCAAGTGGTCGCGCCGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAGCACGCCGAGGG GTCGGTACTGGTCGAGTTCGGTGACACCAAGGTCATCTGCACGGTCAGCGTCGAAAATGGTGTTCCCCGCTTCCTCAAAG GCCAGGGCCAAGGCTGGCTGACCGCCGAGTACGGCATGCTGCCGCGCTCCACTGGCGAGCGTAACCAGCGCGAGGCCAGC CGTGGCAAGCAAGGCGGCCGCACCCTCGAGATCCAGCGCCTGATCGGCCGCTCCCTGCGCGCCGCGCTGGACATGAGCAA GCTGGGTGACATCACGCTGTACGTTGACTGCGACGTGATCCAGGCCGACGGCGGTACCCGCACCGCGTCGATCACCGGCG CCATGGTCGCCCTGTGCGACGCCCTGGCGGTGATCAAGAAGCGCGGCGGTCTCAAGGGCGGCAACCCGCTCAAGCACATG ATCGCCGCAGTGTCGGTGGGCATGTACCAGGGTGAGGCTGTGCTTGACCTCGATTACCTCGAAGACTCCGCCGCCGAGAC CGACCTGAACGTGGTCATGACCAGCGCCGGTGGCTTCATCGAAGTGCAGGGCACCGCCGAAGGCGCGCCGTTCCAGCCTG AGGACTTCAACGCCATGCTGGCGCTGGCGCAGAAGGGCATGGGCGAGATCTTCGAACTGCAGCAGGCTGCGTTGGCTGAC TGA Protein sequence : MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS RGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHM IAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMGEIFELQQAALAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-63 | 59 |
