Gene Information

Name : algR (PSEEN5354)
Accession : YP_610754.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 5672659 - 5673324 bp
Length : 666 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2493441, 2544550, 815916, 7698672; Product type r : regulator

DNA sequence :
ATGGAGCCCAGCGCCACCAACGGCGAGGAGGCCCTGGCACTGATCGAGAGCCTCAAGCCCGATGTGGTGCTGCTGGACAT
CGGTATGCCCGGCCTCGATGGCCTGCAGGTGGCCGCCAAGCTGTGCGAGCGCGAGGCGCCGCCGGCGGTGGTGTTCTGCA
CCGGTGACGACGAATACGGCAGCCAGGCCTTCAAGGAGAGCACCTTGAGCCATGTCGACAAACCCATCCAGCCCCAGACC
CTGCGCGACGCCTTGCGCCGCGCGGAAAAACCCAACCGCGCGCAATTGGCGGCGCTGACCCGGCCCACCAGCGATGAGGG
TGGCGGCCCGCGCAGCCATATCAGTGCCCGCACCCGCAAGGGCATCGAGCTGATCCCGTTGCCGCAAGTCATCTATTTCA
TCGCCGACCATAAATACGTCACCCTGCGCCACGAAGCGGGCGAGGTGCTGCTCGACGAGCCGTTGAAGGCGCTGGAAGAC
GAGTTCGGCGAGCGCTTTGTGCGCATACACCGTAACGCCCTGGTCGCCCGCGAGCGCATCGAAAAACTGCAGCGCACGCC
GCTGGGGCATTTCCAGCTCTATCTCAAGGGGTTGGAAGGGGACGCCCTGACCGTCAGCCGCCGGCATGTGGCCGGGGTGC
GCAAGATGATGCAGACGCTGCATTGA

Protein sequence :
MEPSATNGEEALALIESLKPDVVLLDIGMPGLDGLQVAAKLCEREAPPAVVFCTGDDEYGSQAFKESTLSHVDKPIQPQT
LRDALRRAEKPNRAQLAALTRPTSDEGGGPRSHISARTRKGIELIPLPQVIYFIADHKYVTLRHEAGEVLLDEPLKALED
EFGERFVRIHRNALVARERIEKLQRTPLGHFQLYLKGLEGDALTVSRRHVAGVRKMMQTLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 4e-43 43
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 4e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_610754.1 alginate biosynthesis regulatory protein VFG0119 Protein 1e-85 77