Gene Information

Name : cadR (PSEEN5233)
Accession : YP_610641.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Resistance
Product : transcriptional regulator CadR
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 5551166 - 5551609 bp
Length : 444 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator

DNA sequence : 
ATGAAGATCGGAGAACTGGCCAAGGCCACCGACTGCGCCGTGGAGACCATCCGCTACTACGAACGCGAGCAGCTGCTGCC
CGAGCCGGCCCGCAGCGATGGCAACTATCGGCTGTATACCCAGGCCCACGTCGAGCGGCTGACCTTCATCCGCAACTGTC
GCACCCTGGACATGACCCTGGACGAAATCCGCAGCCTGTTGAACCTGCGTGACAGCCCCGAGGCGTCGTGCGGCAGCGTC
AATGCGCTGATCGACGAGCATATCGAGCATGTGCAGGCACGGATCGACGGGTTGGTGGCGCTGCAGGCGCAGCTGGTGGA
ATTGCGCCAGCAGTGCAATGCGCAGGGAGCGGAGTGCGCGATTCTGCAGCAGCTGGAGACGAATGGGGCGGTGTCGGTGC
CGGAGGTGGAGCACTCACACGTGGGCAGAAGCCACGGGCATTGA

Protein sequence : 
MKIGELAKATDCAVETIRYYEREQLLPEPARSDGNYRLYTQAHVERLTFIRNCRTLDMTLDEIRSLLNLRDSPEASCGSV
NALIDEHIEHVQARIDGLVALQAQLVELRQQCNAQGAECAILQQLETNGAVSVPEVEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-36 56
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 7e-31 48
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 6e-31 48
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 5e-31 48
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 3e-31 48
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-31 48
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 4e-31 48
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 3e-31 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_610641.1 transcriptional regulator CadR BAC0058 Protein 1e-62 96
cadR YP_610641.1 transcriptional regulator CadR BAC0301 Protein 7e-34 64