Gene Information

Name : pilD (PSEEN4668)
Accession : YP_610121.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : type IV pili prepilin peptidase PilD/XcpA
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : -
Position : 4969943 - 4970809 bp
Length : 867 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme

DNA sequence : 
ATGAATGCCTGGGCCGTCGTCGTCGATCATCCGCCGTTCTTTTACACCCTGGCCGCGGTGCTGGGGTTGCTGGTGGGCAG
TTTTCTCAATGTGCTGGCGTATCGGCTGCCGGTGATGCTCGAGCGCCAGTGGCAGCGGGAGGCGCAGGAGGTGCTGGGGC
TGCCGCAGGCCGAGTACGAGCGCTTCGACCTGTGCTTGCCCGCGTCGCGTTGCCCCCACTGCCAGCGCCCGATCCGGGCG
TGGGAAAACATTCCGGTGTTGAGTTACCTGGCCTTGCGCGGGCGTTGCTCGGGGTGCAAGGCGCGGATCAGTGCGCGTTA
TCCACTGGTGGAGCTGGCCACCGCCCTGCTGTCGTTGCTGGTGGCCTGGCATTTCGGGCCCGGTGTGGAAGCGCTGGCGG
TGATGCTGCTGACCTGGGGCCTGATCGGCTTGAGCCTGATCGATGCCGAGCACCAGTTGCTGCCGGATGTGCTGGTGCTG
CCGCTGTTGTGGCTGGGGCTGGTGGTCAATGCCTTCGGGCTGCTGGTGCCGCTGGCCGACGCGGTGTGGGGCGCGGTGGC
GGGTTACCTGAGCCTGTGGGCGGTGTACTGGGTGTTCAAGCTGGTGACCGGCAAGGAGGGCATGGGCTTTGGCGACTTCA
AGCTACTGGCCATGCTCGGGGCCTGGGGTGGTTGGCAGATCTTGCCGCTGACCTTGATGCTGGCCTCGCTGGTGGGGGCG
CTGATCGGGCTGGCGCTGGTACGTTTGAAGCGCACGCAAATGGGCGCTGCGCTACCTTTCGGGCCTTATCTGGCGATTGC
GGGGTGGATCGCCGTGCTCTGGGGTGATGAAATAGTCGCTTCTTACCTGCAACTGCTTGGAACCTGA

Protein sequence : 
MNAWAVVVDHPPFFYTLAAVLGLLVGSFLNVLAYRLPVMLERQWQREAQEVLGLPQAEYERFDLCLPASRCPHCQRPIRA
WENIPVLSYLALRGRCSGCKARISARYPLVELATALLSLLVAWHFGPGVEALAVMLLTWGLIGLSLIDAEHQLLPDVLVL
PLLWLGLVVNAFGLLVPLADAVWGAVAGYLSLWAVYWVFKLVTGKEGMGFGDFKLLAMLGAWGGWQILPLTLMLASLVGA
LIGLALVRLKRTQMGAALPFGPYLAIAGWIAVLWGDEIVASYLQLLGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 6e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilD YP_610121.1 type IV pili prepilin peptidase PilD/XcpA VFG0114 Protein 1e-71 66
pilD YP_610121.1 type IV pili prepilin peptidase PilD/XcpA VFG0234 Protein 3e-42 54
pilD YP_610121.1 type IV pili prepilin peptidase PilD/XcpA VFG2428 Protein 4e-40 50
pilD YP_610121.1 type IV pili prepilin peptidase PilD/XcpA VFG1882 Protein 9e-49 48