Gene Information

Name : colR (PSEEN4458)
Accession : YP_609925.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : response regulator ColR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4770072 - 4770755 bp
Length : 684 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15491368; Product type r : regulator

DNA sequence : 
ATGCGCATTCTGTTGGTTGAAGACAACCGCGATATCCTGGCCAACCTGGCCGACTACCTCGGTATGAAGGGCTATACCGT
CGACTGCGCCCAGGACGGTCTTTCCGGCCTGCACCTGGCCGCCACCGAGCACTACGACCTGATCGTGCTCGACATCATGC
TCCCGGGCATCGATGGCTACACCCTGTGCAAGCGCCTGCGCGAGGATGCGCGCCGCGATACACCGGTGATCATGCTCACT
GCCCGCGATCAACTGGACGACCGTCTGCAAGGGTTCCGCTCCGGCGCCGACGATTACCTGCTCAAGCCGTTCGCCCTGTC
CGAACTGGCCGCGCGCATCGAAGCGGTGCTGCGCCGTGCCCAGGGAGGCGGTCGTCGCACGCTGCAGGTCGCCGACCTGA
GCTACGACCTCGACACGCTGGAAGTCACCCGCCAGGGCCGCCTGCTCAAGCTCAACCCTGTTGGCCTGAAGCTGTTGGCC
GTGTTGATGCAAAAGAGCCCCCACGTGTTGCGCCGCGAAGTGCTGGAGGAAGCCCTGTGGGGCGATGACTGCCCGGACAG
TGACAGCCTGCGCAGCCATGTCCACCAGCTGCGCCAGGTGATCGACAAACCGTTCGACAAAGCCCTGCTGCATACCGTCC
ATGGCGTCGGCTATCGCCTCGCCGAGGGCCGCGATGGAGTTTAA

Protein sequence : 
MRILLVEDNRDILANLADYLGMKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYTLCKRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLLKPFALSELAARIEAVLRRAQGGGRRTLQVADLSYDLDTLEVTRQGRLLKLNPVGLKLLA
VLMQKSPHVLRREVLEEALWGDDCPDSDSLRSHVHQLRQVIDKPFDKALLHTVHGVGYRLAEGRDGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_609925.1 response regulator ColR BAC0197 Protein 3e-35 42
colR YP_609925.1 response regulator ColR BAC0125 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_609925.1 response regulator ColR VFG1390 Protein 5e-31 41
colR YP_609925.1 response regulator ColR VFG0596 Protein 1e-33 41