Gene Information

Name : CzrR (PSEEN4285)
Accession : YP_609756.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : heavy-metal DNA-binding response regulator CzrR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4570067 - 4570741 bp
Length : 675 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10570969; Product type r : regulator

DNA sequence : 
ATGCGCCTACTGATCATCGAGGACGAACCCCGTACCGCCGACTACCTGCAGCAAGGGCTGCGCGAAAACGGCTACGTGGT
CGACTGCGCCCACACCGGTACCGACGGCCTGCACCTGGCCCGCCAGCAGCCCTACGACCTGGTGATCCTCGACGTCAACC
TGCCCGAACTGGACGGCTGGGGCGTGCTGCAGCGCCTGCGCGCAGAATCGTCCACGCGGATCATGATGCTTACCGCCCAC
GGCCGCCTGGCCGATCGGGTCAAGGGCCTGGACCTGGGCGCCGACGACTACCTGCTCAAGCCTTTCGAGTTCCCCGAACT
GCTGGCGCGTATCCGTAGCCTGTTGCGGCGCAACGACCAGCACCTGCAACCCAGCACCCTGAAGGTCGCCGACCTGGAGC
TCGACCCCGGCCGCCATCGCGCCTGGCGCGGTGGCCAGCGCATCGACCTGACCGCCAAGGAGTTCGCCCTGCTGCACCTG
CTGATGCGCCAGAGCGGCGAGGTGCTGTCGCGCACCCAGATCATCTCGCTGGTGTGGGACATGAATTTCGATTGCGACAC
CAACGTGGTCGAGGTGTCGATCCGCCGCCTGCGGGCGAAGATCGACGACCCCTTCGAGGACAAGCTGATCCACACCCTGC
GCGGTGTCGGCTATGTGCTCGAGGCCCGGCCTTGA

Protein sequence : 
MRLLIIEDEPRTADYLQQGLRENGYVVDCAHTGTDGLHLARQQPYDLVILDVNLPELDGWGVLQRLRAESSTRIMMLTAH
GRLADRVKGLDLGADDYLLKPFEFPELLARIRSLLRRNDQHLQPSTLKVADLELDPGRHRAWRGGQRIDLTAKEFALLHL
LMRQSGEVLSRTQIISLVWDMNFDCDTNVVEVSIRRLRAKIDDPFEDKLIHTLRGVGYVLEARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-55 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-54 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR BAC0083 Protein 5e-63 61
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR BAC0125 Protein 6e-66 60
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR BAC0638 Protein 2e-56 60
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR BAC0197 Protein 2e-63 59
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR BAC0308 Protein 2e-57 55
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR BAC0111 Protein 1e-61 55
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR BAC0347 Protein 2e-57 51
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_010079.5776364.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_002952.2859858.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_007622.3794948.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_003923.1003417.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_013450.8614146.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_002951.3238224.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_007793.3914065.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR NC_002758.1121390.p0 Protein 1e-38 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR U82965.2.orf14.gene. Protein 2e-32 42
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR AE000516.2.gene3505. Protein 4e-29 42
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR AE015929.1.gene1106. Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR VFG0596 Protein 8e-56 54
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR VFG1386 Protein 4e-41 44
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR VFG1389 Protein 2e-37 44
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR VFG1390 Protein 4e-39 43
CzrR YP_609756.1 heavy-metal DNA-binding response regulator CzrR VFG0473 Protein 6e-33 41