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Name : PSEEN4280 (PSEEN4280) Accession : YP_609751.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4562136 - 4563575 bp Length : 1440 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter DNA sequence : ATGCTGCCTTATCGCCTGGCGCGCCAGACAGGCCTGGCCATGGCGCCTGCCGAAGGCGGCTGGCAGTTGTGGCTGCGCAG CGACGCCGACAGCGACCAGCTCCAGGAGCTGTTGCGGGTCCATGGCCAGCCAAGTGCGCTGGAACACCTTGACGACGCTC AGTTCGACGAGCGTCTCGGCCAGCTCTACCAGGCCGGCGAGGCGGCGACCGAGGCGTTGATCGAAGGCATCGGCGAACAG GTCGACCTCGACAGCCTGATGAGCGAGATGCCGCGTATCGAGGACTTGCTGGAAAGCGACGACGAAGCGCCGGTGATCCG CCTGATCAACGGCCTGTTCGGCCAGGCCCTGCGCCTGCGCGCCTCGGATATCCATATCGAAACCTTCGAGCAGAGCCTGG TGGTGCGCCTGCGGGTCGACGGTCACCTGCGCGAAGTACTGCGCCCGCCACGGGCGCTGTCGGCGATGCTGGTGTCGCGA ATCAAGGTGATGGCCCGTTTGGACATCGCCGAAAAGCGCCAGCCCCAGGACGGCCGCATCACCCTGCGCGCCGCCGGGCG CGAGGTGGACGTGCGTGTCTCGACCCTGCCCGGCATCCACGGCGAACGGGTGGTGATGCGGGTGCTCGACAAGCAGGCCA GCCTGCTGGCGCTGGACAACCTGGGCATGCCCGCCGCCGTGTTGCGCGGCCTGCGCAGCTGCCTGGCGCGGCCCAACGGC ATCGTACTGTCCACCGGCCCCACCGGCTCGGGCAAGACCACCACCCTGTATGCCAGCCTCAACAGCCTGAACGACGGCAG CCGCAATATCCTCACCGTCGAAGACCCTGTTGAGTACGCCATCGCCGGCATCGGCCAGACCGCCATCAACCCACGGGCCG GGCTGACCTTCGCCAGCGGTCTGCGGGCCATTCTCCGTCAGGACCCGGACGTGATCATGCTGGGTGAGATTCGCGACCAG GAAACCGCGCAGATCGCCGTGCAGGCCAGCCTCACCGGGCACCTGGTGCTGTCGACGCTGCACACCAACAGTGCCGTGGG CGCAGTGACCCGCCTGCGCGACATGGGCGTCGAGCCGTTTCTGATTGCCTCGTGCTTGCGCGGTGTGCTGGCCCAGCGCC TGGTGCGGCGGCTGTGCACCTGCGCGGTGGCGCGGCCGCTGCACAGCGCGGAGCGCGAGCTGTGGCCGCAACTGACCGAA ACCTACCACCCGCTGGGCTGCGAGCGTTGCCAGGGCAACGGCTATGTCGGGCGCCTGGGGTTGTACGAATTCATCGAGCT GGACGACGGGCTGGTGGCATTGCTCTACGACGGCCAGAGTGAACTGGCCATGCAGGCTTACCTGGAGGGTCGCCGGCAGA GCCTGGTGGCGATGGCCGCCGACTGCCTGGCGCAGGGCCAGACCAGCCTCGCCGAAGTGTTGCGCGTGGTGCAGGGCTGA Protein sequence : MLPYRLARQTGLAMAPAEGGWQLWLRSDADSDQLQELLRVHGQPSALEHLDDAQFDERLGQLYQAGEAATEALIEGIGEQ VDLDSLMSEMPRIEDLLESDDEAPVIRLINGLFGQALRLRASDIHIETFEQSLVVRLRVDGHLREVLRPPRALSAMLVSR IKVMARLDIAEKRQPQDGRITLRAAGREVDVRVSTLPGIHGERVVMRVLDKQASLLALDNLGMPAAVLRGLRSCLARPNG IVLSTGPTGSGKTTTLYASLNSLNDGSRNILTVEDPVEYAIAGIGQTAINPRAGLTFASGLRAILRQDPDVIMLGEIRDQ ETAQIAVQASLTGHLVLSTLHTNSAVGAVTRLRDMGVEPFLIASCLRGVLAQRLVRRLCTCAVARPLHSAERELWPQLTE TYHPLGCERCQGNGYVGRLGLYEFIELDDGLVALLYDGQSELAMQAYLEGRRQSLVAMAADCLAQGQTSLAEVLRVVQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-108 | 56 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-108 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEEN4280 | YP_609751.1 | type II secretion system protein E | VFG2048 | Protein | 4e-107 | 56 |
| PSEEN4280 | YP_609751.1 | type II secretion system protein E | VFG0182 | Protein | 1e-104 | 55 |
| PSEEN4280 | YP_609751.1 | type II secretion system protein E | VFG1876 | Protein | 2e-110 | 50 |
| PSEEN4280 | YP_609751.1 | type II secretion system protein E | VFG0233 | Protein | 4e-73 | 48 |
| PSEEN4280 | YP_609751.1 | type II secretion system protein E | VFG2426 | Protein | 6e-64 | 47 |
| PSEEN4280 | YP_609751.1 | type II secretion system protein E | VFG1880 | Protein | 4e-67 | 44 |
