Gene Information

Name : gpJ (PSEEN4161)
Accession : YP_609634.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Unknown
Product : pyocin R2_PP, baseplate/tail fiber protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 4446482 - 4447363 bp
Length : 882 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type h : extrachromosomal origin

DNA sequence :
ATGAGCCAGGTCGACCTGTCGAAGCTGCCGGCCCCGCAGCTGCTCGAAGACCTCGATTTCGAGGCGCTGTACCAGGAGGA
CCTGGCCAGCTTCCGCGCCCAGCTGGGCGATGGCTGGAACGCCAACCTGGAAAGCGACCCGGTCACCAAGCTGCTGGAAG
TCGGCGCCTACCGCAAGCTGCTCAACCGGGCGCGCATCAACGATGCCGCCAAGGCGCTGCTGCTGGCTTATGCCGAAGGC
CGCGACCTCGACCAGCTGGCCGCCAACGTCAACCTGCAACGCCTGGTGATCCAGGCCGCCGACTCGAGCACGATCCCGCC
GACCGAAGCCATCCTCGAAGCCGACGATGCCTTGCGCGAGCGGGTGCAACTGGTCTACGAAGGCCTGACCACCGCCGGCC
CGCGCAACAGCTACATCCTCCACGCCCGCAACGCCTCGGGCCGGGTCGCTGACGCGACCGCCGAGAGCCCGTCGCCCGCC
GTGGTGGACATCACCGTGCTGAGCCTGGATGGCGATGGCGTGGCCAGCCCCGAGCTGCTGGCGCAGGTGCAGGCCTACCT
CAACGACGACGACATTCGCCCGGTCGCCGACCGGGTCAACGTGCGCAGCGCCGAGGTGCTGCCCTACCGCGTCGAGGCCG
TGCTGCACATGGCCGACAACGGCCCGGAGTACGAAACGGTCCTCGGCGAATGCCGGCGCCGCCTGCAAGCCTGGATCAAC
CCACGGCGCAGGCTCGGCCTGGAAGTCGCCCGCTCCGGCATCGACGCCCAGTTGCACATCGACGGCGTGAGCCGGGTCGA
GCTGATCGGCTGGAGCGACATCCGCCCGAGCAAGGCCCAGGCGGCCTGGTGCACCGGCATCGACCTCAAGCGCGGAGGCT
GA

Protein sequence :
MSQVDLSKLPAPQLLEDLDFEALYQEDLASFRAQLGDGWNANLESDPVTKLLEVGAYRKLLNRARINDAAKALLLAYAEG
RDLDQLAANVNLQRLVIQAADSSTIPPTEAILEADDALRERVQLVYEGLTTAGPRNSYILHARNASGRVADATAESPSPA
VVDITVLSLDGDGVASPELLAQVQAYLNDDDIRPVADRVNVRSAEVLPYRVEAVLHMADNGPEYETVLGECRRRLQAWIN
PRRRLGLEVARSGIDAQLHIDGVSRVELIGWSDIRPSKAQAAWCTGIDLKRGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 9e-61 54
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 2e-60 50
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-60 50