Gene Information

Name : lpdV (PSEEN3856)
Accession : YP_609358.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : 1.8.1.4
Position : 4143175 - 4144554 bp
Length : 1380 bp
Strand : +
Note : E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide

DNA sequence :
ATGCAAGACCTCATCAACACCACCCTGCTGATCATCGGCGGCGGCCCCGGCGGCTACGTGGCGGCCATCCGCGCCGGGCA
GCTGGGCATCCCCACCGTGCTAGTCGAAGGCCAGGCCCTGGGCGGCACCTGCCTGAACATCGGCTGCATCCCCTCCAAGG
CGCTGATCCATGTGGCCGAGCAGTTCCATCAGGCCAGCCGCTTCACCGAACCTTCGCCGCTGGGCATCAGCGTGGCCTCG
CCACGCCTGGACATCAGCCGCAGCGTCGAGTGGAAGGACGGCATCGTCGACCGCCTCACCAGCGGCGTCGCCGCCCTGTT
GAAAAAACATGGCGTGAAGGTGATCCACGGCTGGGCGAAGATCCTCGACGGCAAGAGCGTCGAGGTCGACGGCCAGCGCA
TCCAGTGCGAGCACCTGCTGCTGGCCACGGGCTCCAGCAGCGTCGAACTACCGATGCTGCCGATCGGCGGGCCGATCATT
TCGTCCACCGAGGCCCTGGTCCCCAAGGCACTGCCCCAGCACCTGGTGGTGGTCGGCGGCGGCTATATCGGCCTGGAGCT
AGGCATCGCCTACCGCAAGCTCGGCGCCAAGGTCAGCGTAGTGGAGGCGCGCGAACGCATCCTGCCGACCTACGACGCCG
AACTCACCGCGCCGGTGGCGGACTCGATCAACAAGCTTGGCATTGCGCTTTACCTGGGGCACAGCGTCGAGGGCTATACC
GATGGTTGCCTGCTGGCCAGCGATGGCCAGGGCGGGCAACTGCGCCTGGAGGCTGACCAGGTACTGGTGGCCGTGGGCCG
CCGCCCGCGCACCAAAGGCTTCGGCCTGGAAGGCCTGGACCTGAAGATGAACGGCGCCGCCATCGCCATTGACGAGCGCT
GCCAGACCAGCATGCGCAACGTCTGGGCCATCGGCGACGTGGCCGGCGAACCGATGCTGGCGCACCGGGCCATGGCCCAG
GGCGAGATGGTCGCCGAGATCATTGCCGGCAAGGCGCGACGTTTCGAACCCAGCGCCATCGCCGCGGTGTGTTTCACCGA
CCCGGAAGTGGTGGTGGTCGGCAAGACCCCGGAACAGGTCAAGCAAGAGGGCGTGGATTGCCTCGTCGCACAGTTCCCCT
TCGCCGCCAACGGCCGCGCCATGAGCCTGGAGTCGAAAAGCGGTTTCGTGCGCGTGGTGGCCCGCCGTGACAACCACCTG
ATCATGGGCTGGCAGGCCGTTGGCGTGGCGGTTTCGGAGCTGTCCACCGCCTTTGCCCAATCGCTGGAAATGGGTGCGCG
CCTGGAAGATATCGCCGGCACCATCCACGCCCACCCAACCCTGGGCGAAGCCGTGCAAGAAGCTGCCTTGCGCGCCCTTG
GCCATGCGCTGCATATCTAG

Protein sequence :
MQDLINTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVAS
PRLDISRSVEWKDGIVDRLTSGVAALLKKHGVKVIHGWAKILDGKSVEVDGQRIQCEHLLLATGSSSVELPMLPIGGPII
SSTEALVPKALPQHLVVVGGGYIGLELGIAYRKLGAKVSVVEARERILPTYDAELTAPVADSINKLGIALYLGHSVEGYT
DGCLLASDGQGGQLRLEADQVLVAVGRRPRTKGFGLEGLDLKMNGAAIAIDERCQTSMRNVWAIGDVAGEPMLAHRAMAQ
GEMVAEIIAGKARRFEPSAIAAVCFTDPEVVVVGKTPEQVKQEGVDCLVAQFPFAANGRAMSLESKSGFVRVVARRDNHL
IMGWQAVGVAVSELSTAFAQSLEMGARLEDIAGTIHAHPTLGEAVQEAALRALGHALHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 1e-72 42