|
Name : kdpB (PSEEN3608) Accession : YP_609129.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 3891860 - 3893914 bp Length : 2055 bp Strand : - Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGAACATGCCCATTCCTGAAGTGAAGGCGCGCCAGAGCGCCAAGGACCAGACCCGCTTCGCCGCCCTGTGGCGCCCGGC GCTGGTCCAGGCTTTCGTCAAGCTCGACCCGCGCCAGCTCAAGCGCGCCCCGGTGATGCTGGTGGTGGCTCTCACCGCCG TGCTGACCACCGTGCTGTGCTTCGCCCCCGGCAGCGGCGTGAGCACTAGCGTGGCGGTGCAGATCGCCGTCTGGCTGTGG TTCACCGTGCTGTTCGCCAACTTCGCCGAAGCCTTGGCTGAAGGTCGCGGCAAGGCCCGCGCTGACAGCCTCAAGGCCGG CAGCCAGGGCCTGACCGCCAAGCGCCGCAAGAGTGATGGCAGCTTCGAGACCGTCGCCGCCACCCAGCTGCGCAAGGATG ATGTGGTGCGCGTCGTGGCCGGCGAGATGATCCCCGGTGACGGCGAGGTGCTCGAAGGTATCGCCGCGGTCAACGAGTCG GCGATCACCGGCGAGTCCGCCCCGGTGATCCGCGAGTCCGGCGGTGACCGCTCGGCGGTGACCGGCAACACTCGCCTGGT GTCCGACTGGCTGCTGGTGCGCATCACCAGCAACCCAGGCGAATCGACCCTCGACCGCATGATCGCCCTGGTCGAAGGCG CCAAGCGCCAGAAGACCCCCAACGAAATCGCCCTGGACATCCTGCTGATCGGCCTGACCCTGATCTTCCTGATCGTGGTG GTGACGTTGCAGCCGTTCGCCCGCTTCGCCGGTGGCGAGCTACCGCTGATCTTCCTCGCCGCGTTGCTGGTGACGCTGAT CCCGACCACCATCGGTGGCCTGCTCTCGGCCATCGGTATCGCCGGCATGGACCGCCTGGTGCGCCTGAACGTGATTGCCC GCTCCGGCCGTGCAGTAGAGGCAGCCGGCGACGTGCACACCCTGATGCTCGACAAGACCGGCACCATCACCTTCGGCAAC CGCCGTTGCAGCGCCCTGCATGCCGCCTCGGGCGTGACCGCCAAGGAGCTGGGGGAGGGCGCCTTGCTCGCCTCGCTGGC CGACGACACTGCCGAAGGCAAATCGATCGTCGAGTACCTGCGCCAACTGCACGACTTCGACGAGCCCTTGAACACGCAAT ATGAAGCCATCGCCTTCAGCGCCGAGACTCGCCTGTCGGGCATCGACTTCCAGCAGCGCCGCTACCGCAAGGGTGCCGTC GATGCGGTGCTGGCCTTCTGCGGCCTGCAACGCTTGGAGCTGCCCGCCGCCCTGGCCCGTGAAGTGGAGCGCATCGCCCA GAGCGGTGGCACGCCGTTGCTGGTGTGCGTCGACAAGCGTCTGCTGGGCGTGATCCACCTCAAGGACGTGGTCAAGCCCG GCATCCGCGAGCGCTTCGCCGAACTGCGCAAGCTCGGTATCCGCACCGTGATGGTTACCGGCGACAACCCGCTGACCGCC GCTGCCATCGCCGCCGAGGCCGGCGTGGACGACGTGCTCGCCGAAGCCACCCCGGAGAAGAAACTGGCACGTATCCGCCA GGAGCAGAACGACGGCCGCCTGGTGGCCATGTGCGGCGACGGCGCCAACGACGCCCCGGCCCTGGCCCAGGCCGACGTGG GCATGGCCATGAACGACGGTACCCAGGCCGCCCGCGAGGCCGCCAACATGGTCGACCTGGACAGCGACCCGACCAAGCTG CTGGACGTGGTGCAGGTGGGCAAGGAACTGCTGGTGACCCGTGGCGCGCTGACCACCTTCTCCATCGCCAACGACGTGGC CAAGTACTTCGCCATCCTGCCGGCGCTGTTCGCCGCCATCTACCCGCAGTTGGGCGTGCTCAACCTGATGCACCTGGCCA GCCCGCAGAGCGCGATCCTCTCGGCCATCGTGTTCAACGCGCTGATCATCATCGTGCTGATCCCCTTGGCCCTGCGCGGG GTGCGGGTGCAGGCCGCCAGCGCCGCCCACCTGCTGCGGCGCAACCTGCTGATCTACGGCCTGGGTGGCATCGTCGTGCC ATTCGCCGGGATCAAGCTGATCGACATGCTGCTCAATGCGCTGCACCTGGTCTGA Protein sequence : MNMPIPEVKARQSAKDQTRFAALWRPALVQAFVKLDPRQLKRAPVMLVVALTAVLTTVLCFAPGSGVSTSVAVQIAVWLW FTVLFANFAEALAEGRGKARADSLKAGSQGLTAKRRKSDGSFETVAATQLRKDDVVRVVAGEMIPGDGEVLEGIAAVNES AITGESAPVIRESGGDRSAVTGNTRLVSDWLLVRITSNPGESTLDRMIALVEGAKRQKTPNEIALDILLIGLTLIFLIVV VTLQPFARFAGGELPLIFLAALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIARSGRAVEAAGDVHTLMLDKTGTITFGN RRCSALHAASGVTAKELGEGALLASLADDTAEGKSIVEYLRQLHDFDEPLNTQYEAIAFSAETRLSGIDFQQRRYRKGAV DAVLAFCGLQRLELPAALAREVERIAQSGGTPLLVCVDKRLLGVIHLKDVVKPGIRERFAELRKLGIRTVMVTGDNPLTA AAIAAEAGVDDVLAEATPEKKLARIRQEQNDGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVDLDSDPTKL LDVVQVGKELLVTRGALTTFSIANDVAKYFAILPALFAAIYPQLGVLNLMHLASPQSAILSAIVFNALIIIVLIPLALRG VRVQAASAAHLLRRNLLIYGLGGIVVPFAGIKLIDMLLNALHLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 6e-143 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 5e-143 | 59 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-122 | 57 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-122 | 57 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 9e-123 | 57 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-122 | 57 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-122 | 57 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 5e-123 | 54 |
