Gene Information

Name : PSEEN3568 (PSEEN3568)
Accession : YP_609093.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : 3.6.3.-
Position : 3850114 - 3851724 bp
Length : 1611 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme

DNA sequence :
ATGAGCCAAGACACCCTGATCGAAGTCCGCGACCTGGCGGTGGAGTTCGTCACTGGCGAGCAGGTCAACCGCGTGGTCGA
CGGCATCAGCTTCGACATCCGCAAGGGCGAGACCCTGGCCCTGGTCGGTGAAAGCGGCTCGGGCAAGTCGGTGACCGCGC
ATTCGATTCTGCGCCTGCTGCCCTACCCGCTGGCGCGGCATCCTTCCGGCACCATCCAGTACGGCGGCAAGGACCTGCTG
CACCTGGGCGAGAAACCCATGCAACGGATTCGCGGCAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCGCTGAA
CCCGCTGCACAGCATCGAGAAGCAGATCAATGAGATTCTGTTGCTGCACAAGGGGCTGACCGGCAAGGCCGCCACGGCGC
GCACGCTGGAGCTGCTGGAGCTGGTTGGTATTCCCGAGCCGAAGAAGCGCCTGAAAGCCCTGCCCCATGAGCTGTCCGGT
GGCCAGCGCCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCCGAACTGTTGATCGCCGACGAGCCCACCACGGC
GCTCGACGTGACCGTGCAGTTGAAGATTCTCGACCTGCTCAAGGAGCTTCAAGCGCGCTTGGGGATGGCCCTGCTGCTGA
TCAGCCACGACCTCAACCTGGTGCGCCGCATCGCCCACCGCGTGTGCGTGATGCAGTGCGGCAAGATCGTCGAGCAGGCC
AATTGCGCCACGCTGTTCAGCAAGCCGCAGCATCCGTATACGCAGATGCTGATCAACGCCGAGCCCAGCGGCGCGCCTGC
CGCGAATGCCGAAGGGGCGCCGTTGCTGGAGGTGAAGGACCTGAAGGTGTGGTTCCCGATCAAGAAGGGGCTGCTGCGCC
GGACCGTAGACCATGTAAAGGCCGTGGATGGGGTGAACTTCAGCCTGCCACAGGGGCAGACGCTCGGGATCGTTGGCGAG
AGTGGGTCGGGCAAGTCCACCTTGGGACTAGCCATCCTGCGGTTGATTTCCAGCCAGGGTGGTATTCGCTTCCATGGGCA
GAATCTTGAAGGGCTGAACCAGAAGGCCGTGCGGCCGCTGCGGCGGGAGATGCAGGTGGTGTTTCAGGATCCCTTTGGCA
GCCTGAGCCCGCGCATGTGCGTGGCGGATATCGTTGGCGAAGGATTACGGATTCACAAGATCGGCACGCCGGCTGAGCAG
GAAGCGGCGATTATCGCGGCGCTTGAGGAAGTGGGGCTGGATCCGCGGACGCGCCATCGGTATCCCCATGAGTTTTCTGG
GGGGCAGCGGCAGCGGATTGCGATTGCCCGGGCGTTGGTGTTGAAGCCTGCGTTGATTTTGCTGGATGAGCCTACCTCGG
CGCTGGATCGGACGGTGCAGCGGCAGGTGGTTGAGTTGCTGCGGAATTTGCAGGTTAAGTACAACCTCACCTACCTGTTC
ATCAGCCATGACCTGGCGGTGGTGAAGGCGTTGAGTCATCAGTTGATGGTGATCAAGCATGGGCAGGTGGTGGAACAGGG
GGATGCGGGGGCTATATTTCATGAGCCGAAGCATGGGTATACGAGGCAGTTGTTGCAAGCGGCGTTTTTGGAGAGTGCGC
CATCTGCTTGA

Protein sequence :
MSQDTLIEVRDLAVEFVTGEQVNRVVDGISFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGTIQYGGKDLL
HLGEKPMQRIRGNRIAMIFQEPMTSLNPLHSIEKQINEILLLHKGLTGKAATARTLELLELVGIPEPKKRLKALPHELSG
GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLLKELQARLGMALLLISHDLNLVRRIAHRVCVMQCGKIVEQA
NCATLFSKPQHPYTQMLINAEPSGAPAANAEGAPLLEVKDLKVWFPIKKGLLRRTVDHVKAVDGVNFSLPQGQTLGIVGE
SGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHKIGTPAEQ
EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQVKYNLTYLF
ISHDLAVVKALSHQLMVIKHGQVVEQGDAGAIFHEPKHGYTRQLLQAAFLESAPSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-77 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-77 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-77 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-77 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-96 43