|
Name : PSEEN3557 (PSEEN3557) Accession : YP_609083.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Virulence Product : arginine/lysine/ornithine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.- Position : 3837211 - 3839451 bp Length : 2241 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme DNA sequence : ATGTACAAGGACCTCAAGTTCCCGATCCTCATCGTCCATCGCGCGATCAAGGCCGACAGCGTCGCCGGCGAGCGGGTACG GGGCATCGCCGACGAACTGGCCCAGGACGGCTTCGCCATCCTCGCCGCCGCCGACCAGGCAGAAGCCCGCCTGGTCGCCG CGACCCACCACGGCCTGGCCTGCATGCTGATCGCCGCCGAAGGCGCCGGCGACAACTCCCACCTGCTACAGAACATGGCC GAGCTGATCCGTCTGGCCCGCTTGCGTGCGCCCAACCTGCCGATCTTCGCCCTGGGCGAGCAGGTCACCCTGGAAAACGC CCCGGCCGAGGCCATGGGCGAGCTCAACCAGTTGCGCGGCATCCTCTATTTGTTCGAAGACACCGTGCCGTTCCTCGCCC GCCAGGTGGCGCGGGCCGCGCACAATTACCTCGACGGGCTGCTGCCGCCTTTTTTCAAGGCGCTGGTGCAGCACACCGCG CAATCCAACTATTCCTGGCACACGCCGGGCCACGGCGGTGGGGTGGCCTACCGCAAGAGCCCGGTGGGGCAGGCGTTCCA CCAGTTCTTCGGCGAAAACACCCTGCGCTCGGACTTGTCGGTGTCCGTGCCGGAGTTGGGCTCGCTGCTCGACCACACCG GCCCCCTGGCCGAAGCCGAGGCCCGCGCCGCGCGCAACTTCGGCGCGGACCACACCTTCTTCGTCATCAACGGCACCTCC ACCGCCAACAAGATCGTCTGGCACGCCATGGTCGGGCGCGACGACCTGGTACTGGTGGACCGCAACTGCCACAAGTCGGT GGTGCACGCGATCATCATGACCGGGGCGATTCCGATCTACCTGTGCCCGGAGCGCAACGAACTGGGGATCATCGGGCCGA TTCCGCTCAGCGAATTCAGCCCGGCGTCGATCCAGGCGAAGATCCAGGCCCACCCGCTGGCCCAGGGGCGCACGCCGAGG ATCAAGTTGGCGGTGGTCACCAACTCCACCTACGACGGCCTGTGCTACCACGCCGGGCTGATCAAGCAGACCTTGGGCGC CAGCGTCGAGGTGCTGCATTTCGACGAGGCCTGGTTCGCCTACGCCGCCTTCCACGATTTCTTCGAAGGCCGTTACGCAA TGGGCACGCCGCGGGCGGCGGACGATCCACTGCTGTTCAGCACCCACTCCACCCACAAGCTGCTGGCCGCGTTCAGCCAG GCGTCGATGATCCATGTGCAGGACGGCGCGACCCGCCAGTTGGACCGCGACCGTTTCAACGAAGCGTTCATGATGCATAT CTCCACCTCGCCGCAGTACAGCATCCTCGCCTCGCTGGACGTGGCCTCGAGCATGATGGAGGGGCCGGCCGGGCGTTCGC TGCTGCAGGAGATGTTCGACGAGGCCCTGAGCTTTCGCCGGGCGTTGGCCAACCTGCGCCAGCACCTTGCGGCGCAGGAC TGGTGGTTCAGTATCTGGCAGCCGCCGGCCACGGAGCGCCTGGCGGCGGCGGACTGGGTGTTGCAGCCGGGGGCGGACTG GCATGGTTTCGGCGAGGTGGCTGACGACTACGTATTGCTCGACCCGCTCAAGGTAACCCTGGTGATGCCAGGGCTCGATG CCGGGGGCAAGTTGGGCGAGCAGGGCATTCCGGCTGCGGTGGTCAGCAAGTTCCTCTGGGAGCGCGGCCTAGTGGTGGAG AAGACCGGCCTGTACAGCTTTCTGGTGCTGTTCTCGATGGGCATCACCAAGGGCAAGTGGAGCACCTTGCTCACCGAATT GCTGGAGTTCAAGCGCCATTACGATGGCAACACGCCGCTCGACCAGTGCCTGGCCAGCGTGGTGGCGGTGCAGCCGACGC GTTATCGGGGGTTGGGCCTGCGCGACCTGTGCGACCAATTGCACGCCTGCTATCGCGCCAATGCCACCGCCAAGCAACTC AAACGGTTGTTCACGCGGTTACCCGAGGTGGCCATGAGCCCGGCCCAGGCCTATGACCGGATGGTGAAGGGGGAGGTGGA GGCGGTGCCGATCGAACAGCTGCTGGGGCGGGTTTGCGCCGTGATGCTGGTGCCCTATCCGCCGGGGATCCCGCTGATCA TGCCGGGCGAGCGTTTCACCGAGGCGACCCGCTCGATCCTCGACTACCTGGCGTTTGCCCGGGCCTTCGACCAGGGCTTC CCGGGCTTTGTCGCCGATGTGCACGGCCTGCAGCATGACGGGCCGCTGTACACGGTGGATTGCGTCAGGGAATGCGGATG A Protein sequence : MYKDLKFPILIVHRAIKADSVAGERVRGIADELAQDGFAILAAADQAEARLVAATHHGLACMLIAAEGAGDNSHLLQNMA ELIRLARLRAPNLPIFALGEQVTLENAPAEAMGELNQLRGILYLFEDTVPFLARQVARAAHNYLDGLLPPFFKALVQHTA QSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS TANKIVWHAMVGRDDLVLVDRNCHKSVVHAIIMTGAIPIYLCPERNELGIIGPIPLSEFSPASIQAKIQAHPLAQGRTPR IKLAVVTNSTYDGLCYHAGLIKQTLGASVEVLHFDEAWFAYAAFHDFFEGRYAMGTPRAADDPLLFSTHSTHKLLAAFSQ ASMIHVQDGATRQLDRDRFNEAFMMHISTSPQYSILASLDVASSMMEGPAGRSLLQEMFDEALSFRRALANLRQHLAAQD WWFSIWQPPATERLAAADWVLQPGADWHGFGEVADDYVLLDPLKVTLVMPGLDAGGKLGEQGIPAAVVSKFLWERGLVVE KTGLYSFLVLFSMGITKGKWSTLLTELLEFKRHYDGNTPLDQCLASVVAVQPTRYRGLGLRDLCDQLHACYRANATAKQL KRLFTRLPEVAMSPAQAYDRMVKGEVEAVPIEQLLGRVCAVMLVPYPPGIPLIMPGERFTEATRSILDYLAFARAFDQGF PGFVADVHGLQHDGPLYTVDCVRECG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 2e-128 | 43 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 6e-125 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEEN3557 | YP_609083.1 | arginine/lysine/ornithine decarboxylase | VFG1670 | Protein | 1e-128 | 43 |
