Gene Information

Name : rdgB (PSEEN0312)
Accession : YP_606090.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Unknown
Product : putative deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 324369 - 324962 bp
Length : 594 bp
Strand : -
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
ATGAATTTCCAGCAACTCGTATTGGCCAGCCACAACGCCGGCAAGCTCAAGGAACTGCAAGCGATGCTCGGCGAGTCCGT
GCACCTGCGTTCGATCGGTGAATTCAGCCAGGTGGAGCCGGAAGAGACCGGCCTGTCGTTCGTCGAGAACGCCATCCTGA
AAGCCCGCAACGCCGCCCGTATCTCCGGGCTGCCGGCCCTGGCCGACGACTCGGGCCTGGCGGTGGACTTCCTCGGCGGC
GCGCCAGGCATCTACTCGGCGCGCTACGCCGACGGCAAGGGCGATGCGGCGAACAACGCCAAGCTCCTCGAGGCGTTGAA
AGATGTGCCCCGTGAGCAACGTGGCGCGCAGTTCGTCTGCGTCCTGGCGCTGGTGCGCCACGCCGACGACCCGCTGCCAA
TCCTCTGCGAAGGCCTGTGGCACGGCAGCATCCTGTTCGAGGCCAGCGGCGAGCACGGTTTCGGCTACGACCCGCTGTTC
TGGGTCCCGGAGCGCAAGTGCTCCAGCGCCGACCTCGCCCCTGTCGACAAGAATCAGCTCAGCCACCGCGCCCGTGCCAT
GGCCCTGCTGCGCCAACGTCTGGGCCTGGCATGA

Protein sequence :
MNFQQLVLASHNAGKLKELQAMLGESVHLRSIGEFSQVEPEETGLSFVENAILKARNAARISGLPALADDSGLAVDFLGG
APGIYSARYADGKGDAANNAKLLEALKDVPREQRGAQFVCVLALVRHADDPLPILCEGLWHGSILFEASGEHGFGYDPLF
WVPERKCSSADLAPVDKNQLSHRARAMALLRQRLGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 2e-20 45