Gene Information

Name : PSEEN2969 (PSEEN2969)
Accession : YP_608534.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3132091 - 3132792 bp
Length : 702 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator

DNA sequence : 
ATGCCCAACATTCTCCTGGTCGAAGACGACAGCGCGCTGTCCGAGCTGATCGCCAGCTACCTGCAACGCAACGATTTCCA
TGTCCGGGTGATTGCCCGGGGCGACCATGTGCTGGACGAATTCCGTCGGCAGAAACCGGACCTGGTGATCCTCGACCTCA
TGCTCCCGGGCCTGGATGGCCTGCAGGTGTGCCGCCTGCTGCGCCAGGAGACGCAGTGCCTGCCGATCCTGATGCTGACC
GCCCGCGACGACAGCCACGACCAGGTGCTGGGCCTGGAAATGGGCGCCGATGACTACGTCACCAAGCCCTGCGAGCCCCG
GGTTTTGCTGGCCCGCGTGCGCACCCTGCTGCGCCGCAGCAGCGTCAACGAGCCGCGCCTGGACAGCGACCTGATCCAGG
TCGGCGGCCTGCGCATCGACCTGGCCGAGCGTAGCGTCAGCTGGCGCGGCGAGGAGGTGGAGCTGTCCAGCGGCGAGTAC
AACCTGCTGGTGGTGCTGGCGCGCAATGCCGGCGAGGTGATGAGCCGCGACCGCATTCTCCAGCAATTGCGCGGCATCGA
GTTCAACGGCACCGACCGTTCGGTGGACGTGGCCATCTCCAAGCTGCGCCGGCGCTTCGACGACAACGCCGGCGAAGCGC
GCAAGATCAAGACCGTGTGGGGCAAGGGCTACCTGTTCAGCCGGGTCGAGTGGGAGTACTGA

Protein sequence : 
MPNILLVEDDSALSELIASYLQRNDFHVRVIARGDHVLDEFRRQKPDLVILDLMLPGLDGLQVCRLLRQETQCLPILMLT
ARDDSHDQVLGLEMGADDYVTKPCEPRVLLARVRTLLRRSSVNEPRLDSDLIQVGGLRIDLAERSVSWRGEEVELSSGEY
NLLVVLARNAGEVMSRDRILQQLRGIEFNGTDRSVDVAISKLRRRFDDNAGEARKIKTVWGKGYLFSRVEWEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN2969 YP_608534.1 response regulator NC_008702.1.4607594. Protein 2e-29 43
PSEEN2969 YP_608534.1 response regulator NC_002952.2859905.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_007793.3914279.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_007622.3794472.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_002745.1124361.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_009782.5559369.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_002951.3237708.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_003923.1003749.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_002758.1121668.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_009641.5332272.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator NC_013450.8614421.p0 Protein 5e-32 42
PSEEN2969 YP_608534.1 response regulator AE000516.2.gene3505. Protein 2e-36 42
PSEEN2969 YP_608534.1 response regulator CP000034.1.gene3671. Protein 4e-39 41
PSEEN2969 YP_608534.1 response regulator BAC0596 Protein 9e-31 41
PSEEN2969 YP_608534.1 response regulator CP000034.1.gene2186. Protein 4e-32 41
PSEEN2969 YP_608534.1 response regulator NC_002695.1.916589.p Protein 3e-32 41
PSEEN2969 YP_608534.1 response regulator CP001138.1.gene2239. Protein 9e-31 41
PSEEN2969 YP_608534.1 response regulator BAC0039 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN2969 YP_608534.1 response regulator VFG0596 Protein 2e-20 41