Gene Information

Name : PSEEN2757 (PSEEN2757)
Accession : YP_608337.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2896490 - 2897152 bp
Length : 663 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator

DNA sequence : 
ATGCGGCTGCTGCTGGTTGAGGACGACATCGCACTGGGTGAAGGGATCTGTGACGGCTTGCGCCAGGAGGGCTACACCCT
CGACTGGCTGCGCGATGGTGTCAGCGGCTTGCATGCGCTGCAGCATGAAGCCTTCGATCTGGTGATTCTGGACCTTGGCT
TGCCGCGCATGGACGGCATCGAACTGCTACGGCGGGTACGTGCCGGCGGCGACAGCCTGCCGGTGCTGATTTTAACCGCA
CGGGACGCGCTGGACGACCGCATCAGCGGCCTCGATGCCGGCGCCGACGATTACTTGGTCAAGCCCTTCGACCTCAACGA
GCTCAAGGCACGCTTGCGCGCCTTGCTGCGGCGCAGCGCGGGACGCGCCAAGGTGCTGATCGAACATGCCGGGGTCAGCC
TCGACCCTGCTACCCAGCAAGTGCACTACAACGGCATGGAAATCGTGCTGACCCCGAAGGAGTACAGGCTGTTGCACGAG
TTGTTGGCGCAACCCGGCAAGGTATTCACCCGTGAGCGCCTGACCCAGCTGCTGTACGGCTGGGACGAAGAGCCCGAGAG
CAATACGCTGGAGGTGAACATCTACCACCTGCGCAAGAAACTGTTCAACGGCTTGATCCGCACGGTGCGCGGCATCGGCT
ACCTGGTAGAGGCCAAGGCATGA

Protein sequence : 
MRLLLVEDDIALGEGICDGLRQEGYTLDWLRDGVSGLHALQHEAFDLVILDLGLPRMDGIELLRRVRAGGDSLPVLILTA
RDALDDRISGLDAGADDYLVKPFDLNELKARLRALLRRSAGRAKVLIEHAGVSLDPATQQVHYNGMEIVLTPKEYRLLHE
LLAQPGKVFTRERLTQLLYGWDEEPESNTLEVNIYHLRKKLFNGLIRTVRGIGYLVEAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-30 45
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-26 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-25 42
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 9e-21 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 6e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN2757 YP_608337.1 DNA-binding response regulator BAC0487 Protein 8e-32 49
PSEEN2757 YP_608337.1 DNA-binding response regulator NC_002516.2.879194.p Protein 2e-27 43
PSEEN2757 YP_608337.1 DNA-binding response regulator U82965.2.orf14.gene. Protein 6e-25 42
PSEEN2757 YP_608337.1 DNA-binding response regulator Y16952.3.orf35.gene. Protein 9e-26 41
PSEEN2757 YP_608337.1 DNA-binding response regulator BAC0308 Protein 5e-26 41
PSEEN2757 YP_608337.1 DNA-binding response regulator BAC0197 Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEEN2757 YP_608337.1 DNA-binding response regulator VFG0473 Protein 2e-36 48
PSEEN2757 YP_608337.1 DNA-binding response regulator VFG0596 Protein 1e-26 42
PSEEN2757 YP_608337.1 DNA-binding response regulator VFG1390 Protein 2e-30 41