|
Name : PSEEN2550 (PSEEN2550) Accession : YP_608152.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Unknown Product : RND family multidrug efflux transporter Function : - COG functional category : R : General function prediction only COG ID : COG1033 EC number : - Position : 2670837 - 2673197 bp Length : 2361 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter DNA sequence : ATGCTGGCTTATCTGGTCTCGGCGCTCGAGCGCCTGGTCTTTCGCCATCGCCTGGCGACCCTCGGCCTGCTGGCCGTGGT CACCCTGGTGATGGGCCTGTTCGCCGCGCGTCTGGAGATGTCGGCGGGCTTCGACAAACAGCTGCCGCAGCAGCACCCCT ATATCAAGACTTTCAACCAGTACCGTGACGTGCTGTTCGGCGCCAACCGGGTCATCGTGGTGCTGCGGGCGCGCCACGGC GATATCTGGAACCCGGCGGCGCTGACCCGCCTGCACGACTTGACCCAGACGCTGTTCTTCCTGCCGGGCATCGACCGGCG CAGCGTCACCTCGCTGTGGACGCCGAACACCCGCGCCGTGCAGATCACCGAGGAGGGCATGAAGGCCGAGGACGTGGTCG GCGGCGATGTCACCGTCGGCAACCTCGACGCCCGGGCCATCGCCGGCATACGCGAGCGCACCCTGGCCGGCGGCTTCGTC GGCAGCCTGGTGGCCAACGACCAGCGCGGGGCGATGGTGGTGGCGGAGCTGGCCGACCCGGACCCGGCCACGGGCAAGCG CCTGGACTATCTCGCCTTTAGCCGGCAGCTGGAGGAGCAGGTGAGGGCGCAGTACGCCAACACCGACTTCGACGTGCAGA TCATCGGCTTCGCCAAGCAGATGGGCGATATCGGCGCCGGCGCCCGCAGCGTGGTCGAATTCTTCGCCCTGGCGTTCGTG CTCACGGCGCTGGCGGTCTATTGGTACACCCGCTCCTGGCGCCTGACCGTGCTGCCGCTGGTGTGCTCGCTGGTGTCGGT GGCGTGGCAGTTCGGCACCCTGACGCTGCTGGGCTTCGGCCTCGACCCGCTGGCGATCCTGGTGCCGTTCCTGGTGTTCG CCATCGGCGTTTCCCATGGCGTGCAGCAGGTCAACTTCATCGCCAAGGAGGTGTGTGCCGGTGCCGATGGCATGACCGCC GCCCGGCGCAGTTTCGTCGGGCTGATGATCCCGGGCACCCTGGCACTGATCACGGCTTTCGTCGGGTTTGCGACGCTGGT GCTGGTGCCGATCCCGATGATCCGCGAGCTGGCCATCACCGCCTCGGTGGGGGTGGCCTACAAGATCGTCACCAACCTGG TGATGCTGCCGGTGCTGGCCAGCTACTGCTGCTTCGACAGCCGCTACGTGGCACGGGTCGAGCGCCTGCGGGCGCGCCGA GAGGGGCTGATGACCGGCCTCGGGCGTATCGCCGAGCCACGCAACGCGGTGCTGGTGGCGCTGCTGGGTGCGGTGCTGAT GGTGCTGGCGGTGTGGCAGAGCCAGGGCCGGCATGTCGGCCATGTGCTGCCTGGCGCACCCGAGCTGCACGCCGACTCGC GCTACAACCAGGACGTGGAGCAGGTGGTAGGGCACTTCGCCCTGGGCCTGGACCTGTTCACCGTGGCCGTGCAGACCCCG GCGGGCGGTTGCTACCGGCATGATGTGATGGCCTATGTCGACCGCCTGACCTGGTACCTGGGCACCTTGCCCGGCGTGTT GTCGGCGCAGTCGCTGCCGGCCATGGCCAAGCTGGCGGCCTCGGGGGTAAACGAAGGGCAGCCGAAGTGGGCGGCGCTGC CGGTCGACGAGCTGTCCCTGGGCGAGGCCGTGCGCCAGGTGCCCGAGGCGCTGCGCCTGTATGACGCCGACTGTACCGTG CTGCCGGTCAACCTGTACCTGGCCGACCACAAGGCCAGCACCCTCAAGCAGGTGACTGCGGCCATCGAGCAGTACCGCGA GCGCTATGTCCTGCCCGGGGTGAACGTGCGCCTGGCCAGCGGCAACGCCGGGGTGCAGGCCGCCACCAACGCGGTGGTGG AGGGCTCCGAGCTGCCGATGATGCTCTATGTGTACCTGACCATCGTGCTGCTGGTAGGGCTGGTGTACCGCGACTGGCGG GCCATGCTCGCCTGCTGCCTGCCGCTGACCCTGGCGACCTTCCTCGGGTACTGGTTCATGAAGGCCCTCGACATCGGCCT GACCGTGGCCACCTTGCCGGTGATGGTGCTGGCCGTGGGCGTGGGGGTGGATTACGCCTTCTACATCTACAACCGCCTGC AACTGCACCTGGCGGCGGGCCGCGACATCGTTGCCGCGTTCCAGCAGGCGTTGCGCGAGGTGGGCGTGGCCACGGTGTTC ACCGCGCTGACGCTGTCGGTGGGGGTGGCCACCTGGTCGTTTTCGGCGCTGAAATTCCAGGCCGACATGGGCCTGCTGCT GACCTTCATGTTCATGGCCAACATGCTGATGGCGGTGACCCTGCTGCCGGCCCTGGCCGTGGTCCTGGAAATACTGGTTC CGCGACGGGGGCCGGTACGTGCGCCCCTGGTCGCCCATTAA Protein sequence : MLAYLVSALERLVFRHRLATLGLLAVVTLVMGLFAARLEMSAGFDKQLPQQHPYIKTFNQYRDVLFGANRVIVVLRARHG DIWNPAALTRLHDLTQTLFFLPGIDRRSVTSLWTPNTRAVQITEEGMKAEDVVGGDVTVGNLDARAIAGIRERTLAGGFV GSLVANDQRGAMVVAELADPDPATGKRLDYLAFSRQLEEQVRAQYANTDFDVQIIGFAKQMGDIGAGARSVVEFFALAFV LTALAVYWYTRSWRLTVLPLVCSLVSVAWQFGTLTLLGFGLDPLAILVPFLVFAIGVSHGVQQVNFIAKEVCAGADGMTA ARRSFVGLMIPGTLALITAFVGFATLVLVPIPMIRELAITASVGVAYKIVTNLVMLPVLASYCCFDSRYVARVERLRARR EGLMTGLGRIAEPRNAVLVALLGAVLMVLAVWQSQGRHVGHVLPGAPELHADSRYNQDVEQVVGHFALGLDLFTVAVQTP AGGCYRHDVMAYVDRLTWYLGTLPGVLSAQSLPAMAKLAASGVNEGQPKWAALPVDELSLGEAVRQVPEALRLYDADCTV LPVNLYLADHKASTLKQVTAAIEQYRERYVLPGVNVRLASGNAGVQAATNAVVEGSELPMMLYVYLTIVLLVGLVYRDWR AMLACCLPLTLATFLGYWFMKALDIGLTVATLPVMVLAVGVGVDYAFYIYNRLQLHLAAGRDIVAAFQQALREVGVATVF TALTLSVGVATWSFSALKFQADMGLLLTFMFMANMLMAVTLLPALAVVLEILVPRRGPVRAPLVAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01517.1 | transport protein | Not tested | PAGI-1 | Protein | 8e-180 | 56 |
