Gene Information

Name : pmsE (PSEEN2505)
Accession : YP_608111.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : 2,3-dihydroxybenzoate-AMP ligase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1021
EC number : 2.7.7.58
Position : 2627065 - 2628900 bp
Length : 1836 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11222588, 15289555, 15528653; Product type e : enzyme

DNA sequence : 
ATGACCATCGAATTCACGGACTGGCCACAGGACCGTGCGCAGCGCTATCGCGACGCCGGCTACTGGATCGACCAGCCGCT
CACCGAGATCCTCCATTCCCGTTGCCAGGCGCAACCACAAGCCCTGGCGATCATCTGCGGGGAACGTCGCTTCACCTACG
GCGAGCTCGACACCCTGTCCTCGATCCTGGCCTCGCGCCTGGCCGAGCAGGGCCTTGGCCAGGGCGACACGGCCCTGGTG
CAGCTGCCCAACGTGGCGGAGTTCTATATCGTCCTGTTTGCCTTGCTCAAGGCCGGGATCGTGCCGCTCAACGCGTTGTT
CAGCCATCGTCGGCTGGAGTTGACCGCCTACGCCAAGCAGATCGTGCCCAAACTGCTGATCGCCTCCCGCGAGCACGAAG
TGTTCCGCGACGACGCCTATGTGCAGGCCTTCGCCGAAGTCGGCGCGGCGCCTGCGGTGACGTTACTGCTGGGTGAGTCG
GACCCTGCCGCCAGCCTGGCGCACTGGATCGAAACCCCTGGCAGCCAGCCGGTGGCATACGCGCCAACGGCGGCCGACCA
GGTGGCGTTGTTCCAGCTGTCCGGTGGCAGCACCGGGATCCCCAAGTTGATTCCGCGCACCCACAACGACTACCACTACA
ACGCCCGCGCCTGCGCCGATGTCTGCGCGCTCAACGCCCACACCCGCTTCCTCTGCGCGGTGCCGGCGGCGCACAACTTC
CTGCTCAGCTCGCCCGGCGCACTGGGCGTGTTCCATGCCGGTGGCTGCGTGGTGATGGCTGCCAGCCCCGAGCCGCTGAG
CTGCTTCGCGCTGGTCGAGCAGCACGAGGTCAACACCGTCGCGCTGGTGCCGAGCGCCGTTGCCCTGTGGCTGCAAGCCG
CGCCGGCGCACCGTGACAAACTGCAATCGCTGGCCTACCTGCAAGTGGGCGGCGCGGTGTTCGCCGACTCGCTGGCACGC
CAGGTGCCCGGCGTGCTGGGTTGCCAGCTGCAGCAGGTGTTCGGCATGGCCGAGGGGCTGATCAACTACACCCGTCTGGA
CGACAGCGACGAGCAGATCTTCACCACACAGGGCCGCCCGGTCAGCCCGGACGATGAAATCAAGATCGTCGATGAACAGG
GCGTGCCCGTGGCCCCTGGCGAACCTGGCATGCTCGCCACCCGTGGCCCCTATACCTTCTGCGGCTACTACAAGGCCCCC
GAGCAGAACGCCAGTGCCTTCGACGCCGAGGGCTTCTACTACTCCGGCGACCTGGTGGTGCTGACCCCCAGTGGCGACCT
GCGCGTGGTCGGCCGGATCAAGGACCAGATCAACCGCGGCGGCGAGAAGGTCGCCTCGGAAGAGATCGAGAACCTGCTGG
TGCTGCACCCGGAAGTCACCCACGCCGGCCTGGTGGCCATGCCCGACGAGGCGCTGGGTGAAAAGAGCTGTGCCTTCGTC
GTCTCGCGCAACCCCAGCCTCAAGGCCCCGGCCTTGCGCCGTCACCTGATGGAACTGGGTATCGCCGAGTACAAGCTGCC
CGACCGCATTCGCCTGATCGAGGCCATGCCGCTCACCGCGGTGGGCAAGATCGACAAGAAGCAGTTGCGCCACCTGGTGA
GTGTGGAGAACACCCGTACCTGGCTGCAGACCCGTCTACGCCAGCTGATCGAGGACAGCGAGGAGCTGGACCCGGAAGAG
AACCTGATCTTCTACGGCCTCGATTCGCTGCAGGTCATGAAGCTGGCCGCCGAGCTCAAGGCGCGCGGCATCGAGGTGAG
CTTCGAAGAGCTGGCCAGCACGCCGACCCTGGCCAGCTGGTGGGCGTTGGTGGAGGCGCGCCAGAAGGCCGCCTGA

Protein sequence : 
MTIEFTDWPQDRAQRYRDAGYWIDQPLTEILHSRCQAQPQALAIICGERRFTYGELDTLSSILASRLAEQGLGQGDTALV
QLPNVAEFYIVLFALLKAGIVPLNALFSHRRLELTAYAKQIVPKLLIASREHEVFRDDAYVQAFAEVGAAPAVTLLLGES
DPAASLAHWIETPGSQPVAYAPTAADQVALFQLSGGSTGIPKLIPRTHNDYHYNARACADVCALNAHTRFLCAVPAAHNF
LLSSPGALGVFHAGGCVVMAASPEPLSCFALVEQHEVNTVALVPSAVALWLQAAPAHRDKLQSLAYLQVGGAVFADSLAR
QVPGVLGCQLQQVFGMAEGLINYTRLDDSDEQIFTTQGRPVSPDDEIKIVDEQGVPVAPGEPGMLATRGPYTFCGYYKAP
EQNASAFDAEGFYYSGDLVVLTPSGDLRVVGRIKDQINRGGEKVASEEIENLLVLHPEVTHAGLVAMPDEALGEKSCAFV
VSRNPSLKAPALRRHLMELGIAEYKLPDRIRLIEAMPLTAVGKIDKKQLRHLVSVENTRTWLQTRLRQLIEDSEELDPEE
NLIFYGLDSLQVMKLAAELKARGIEVSFEELASTPTLASWWALVEARQKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 7e-85 43
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 9e-85 43
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 2e-85 42
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-85 42
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-85 42
ybtE CAA21394.1 - Virulence HPI Protein 2e-85 42
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 1e-85 42
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 2e-85 42
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 2e-85 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pmsE YP_608111.1 2,3-dihydroxybenzoate-AMP ligase VFG0932 Protein 2e-144 56
pmsE YP_608111.1 2,3-dihydroxybenzoate-AMP ligase VFG0168 Protein 3e-107 46