Gene Information

Name : XcpT-2 (PSEEN2328)
Accession : YP_607941.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Virulence
Product : type II secretion pathway protein G, transport across outer membrane
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2411842 - 2412288 bp
Length : 447 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12754241; Product type s : structural protein

DNA sequence :
ATGCAGATCGCCCGTCGCAGCGCCAGAGGCCGCCGTTTTCGCCAGCAGGGCTTCACCCTGATCGAGATCATGGTGGTGGT
GGTGATCCTCGGGATTCTCGCGGCAATGGTGGTGCCCAAGGTGCTCGACCGCCCCGACCAGGCCCGCGCCACGGCGGCGC
GCCAGGACATCGCCGGGCTGATGCAGGCGCTCAAGCTCTACCGCCTGGACAACGGCGGCTACCCGAACCAGAACCAGGGC
CTGAAGGTCCTGGTGGAAAAGCCGGCCCAGGTCAAGGACGGCCAATGGCGCGCCTACCTCGACCGCCTGCCCAATGACCC
GTGGGGGCGCCCGTACCAGTACCTGAACCCCGGCGCCAACGGCGAGATCGATGTGTTCTCCCTCGGCGCCGACGGCCAGG
CCGGTGGCGACGGGGTGAACACCGACCTCGGCTCCTGGCAGTTGTGA

Protein sequence :
MQIARRSARGRRFRQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDIAGLMQALKLYRLDNGGYPNQNQG
LKVLVEKPAQVKDGQWRAYLDRLPNDPWGRPYQYLNPGANGEIDVFSLGADGQAGGDGVNTDLGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-31 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-31 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XcpT-2 YP_607941.1 type II secretion pathway protein G, transport across outer membrane VFG1871 Protein 2e-37 57
XcpT-2 YP_607941.1 type II secretion pathway protein G, transport across outer membrane VFG0180 Protein 1e-33 57
XcpT-2 YP_607941.1 type II secretion pathway protein G, transport across outer membrane VFG2050 Protein 1e-31 52