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Name : topB (PSEEN2193) Accession : YP_607819.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2304648 - 2306615 bp Length : 1968 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGCCTCTTTCTCTGCGAAAAACCCTCCCAGGCAAAAGACATCGCCAAAGTGCTCGGCGCCCAGCGCCGGGGCGACGG CTGCTGGCAAGGCACCGATGTCTGCGTGACCTGGTGCATCGGCCACCTGCTGGAAACCGCGCCGCCCGACAGCTACGACG AGCGCTACAAGCGCTGGTCGCTCGACGACCTGCCGATCATCCCCGAGAAGTGGAAGATGACGGTCAAGCCCAAGACCGCC AGCCAGTACAAGGCCGTCAAGCGCCTGCTCGGCGAGGCTCGCGAACTGGTAATCGCCACCGACGCCGACCGCGAGGGCGA GATGATCGCCCGCGAGCTGGTCGAGCATTGCCGCTATCGGGGGCCGATCCAGCGCCTGTGGCTGTCGGCCCTGGACGACG CCTCGATCCGCAAGGCGCTGGCGCGCCTGCTGCCCGGCCAGGAAACCTTCAACCTCTACCACTCCGCGCTGGGCCGCTCG CGGGCCGACTGGCTGATCGGCATGAACATGAGTCGCCTGTTCACCCTGCTCGGGCGCCAGTCCGGCTATCAGGGCGTGCT GCCGGTGGGGCGGGTGCAGACACCGACGCTGCGCCTGGTGGTGGACCGCGACCGTAGCATCGCCGATTTCGTGCCGGTCC CCTTCTGGGCCATCGACGTGCAACTGGAAAGCGCCGGCAATGTGTTCAACGCTCAATGGCGTGCGCCGGAGGATGCCTGC GATGACCAGGGCCGCTGCCTGAAGCAGGCCCTGGCGCAACAGGCCGCCCATGACATGCAGGCAGCCGGCAGCGCCCGGGT GATGAAGATCGCCACCGAGCGCGTCCGCGAAACCGCGCCCCTGCCCTTCGACCTGGGCACCCTGCAAGAGGTCTGCTCGA AGAAACTGGGGCTCGGTGCCCAGGAGACCCTGGACATCGCCCAGGCGCTGTACGAAACCCACAAGCTCATCACCTACCCG CGCAGCGACAGCGGTTACCTGCCCCTCAGCCAGCACGGCGAGGCGCCGGGCATCCTCGCCGCGCTGCAACGCGCCGACGC CAGCCTTGCTCCGCTGCAGCCGTACCTCGACCCGCAACGGCGCTCGCGGGCCTGGAACGACCAGAAGGTCAGCGCCCACC ACGGCATCATTCCCACCGCCGCCGCCAGCGACCCGTCGCGCCTGCCACCCAAGTACAAGGCGGTGTACACCCTGATTCGC GCCCGCTACCTCGCCCAGTTCCTGCCCAACCACGAGTACGACCGCACCCAGGCCGATTTCGATTGCGCCGGGCACACGCT GCGGGCGGTCGGCAAGCAGATCATCGAGCCGGGCTGGCGCCGTGCGCTACCTGAGGCGTTGATGCCCCAGAAAGGCCGCG AGGCGCCACCGGCCCAGGTACTGCCGGCATTGCGCGAGGGGCAGGACTGTGCGGTGCAGGGCTTGCAGCTCAAGGATCTG TGGACCCAGCCCCCCAAGCCGTTTACCGAAGGCGACCTGATCAAGGCGATGAAGAACGTCGCCAAACTGGTGGAGGACCC ACTGCTCAAGCAGAAGCTCAAGGAAACCACCGGCATCGGCACCGAGGCGACCCGCGCGAGCATCATCCAGGGCCTGCTCG ACCGCGGCTACCTGGTCAAGAACGGCAAGGCCTTGTCGGCGACACCGGCGGCCTTCAGCCTGATCGACGCCGTGCCCCGG GCCATCGCCGACCCCGGCACCACGGCGATCTGGGAACAGGCGCTGGATATGGTGCAGAACGGCGAGATGAGCCTGGACGA GTTCGTCGCCCGGCAATCGGCGTGGATGGGCAAGCTGGTGCAGCGTTGCTCGGGGATGCGCCTGACGATCACCGGGCCGG CGGCGGGCAAGGCCGCGGCACCGTGGAAGAAGAAGCGCAAGAGTTCAGGCAAGGGCAAGGTCGCGGGGAGCGGGGGCAAA GCAGCAGCGGGCAAGCCAAGGCAGCCACGGCGCAAAACGGCGACCTAG Protein sequence : MRLFLCEKPSQAKDIAKVLGAQRRGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWSLDDLPIIPEKWKMTVKPKTA SQYKAVKRLLGEARELVIATDADREGEMIARELVEHCRYRGPIQRLWLSALDDASIRKALARLLPGQETFNLYHSALGRS RADWLIGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVQLESAGNVFNAQWRAPEDAC DDQGRCLKQALAQQAAHDMQAAGSARVMKIATERVRETAPLPFDLGTLQEVCSKKLGLGAQETLDIAQALYETHKLITYP RSDSGYLPLSQHGEAPGILAALQRADASLAPLQPYLDPQRRSRAWNDQKVSAHHGIIPTAAASDPSRLPPKYKAVYTLIR ARYLAQFLPNHEYDRTQADFDCAGHTLRAVGKQIIEPGWRRALPEALMPQKGREAPPAQVLPALREGQDCAVQGLQLKDL WTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKETTGIGTEATRASIIQGLLDRGYLVKNGKALSATPAAFSLIDAVPR AIADPGTTAIWEQALDMVQNGEMSLDEFVARQSAWMGKLVQRCSGMRLTITGPAAGKAAAPWKKKRKSSGKGKVAGSGGK AAAGKPRQPRRKTAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 66 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 64 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 7e-147 | 51 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-152 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-152 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 7e-153 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 1e-148 | 49 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 4e-117 | 43 |
