Gene Information

Name : ssuB (PSEEN0221)
Accession : YP_606005.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates transport ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : 3.6.3.-
Position : 230508 - 231320 bp
Length : 813 bp
Strand : +
Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease

DNA sequence : 
ATGACCGTGCTCAAGGAACAGCCGCCACGCCTGCTGCGTGGCATTCCCCTGGCGGCCAACGACCTGCGTCGCACCTTTGG
CCAGCGTGAAGTGCTGCGCGGTGTCGATTTGCACATCCCGGCCGGTCAGTTCGTCGCCATCGTCGGGCGCAGTGGCTGCG
GCAAGAGCACCTTGCTGCGCCTGTTGGCCGGGCTCGACCAACCCAGCGGCGGTGAGCTGCTGGCGGGCGCTGCGCCACTG
GCCGAGGCCCGCGAGGACACCCGGCTGATGTTCCAGGATGCGCGCCTGCTGCCCTGGAAGAAGGTGATCGACAACGTTGG
CCTGGGGTTGTCCGGCAACTGGCGGCCCCGCGCCCTGGAAGCGCTGGATGCGGTCGGCCTGGCCGAGCGCGCCCATGAAT
GGCCGGCGGCCTTGTCCGGTGGCCAGAAACAACGGGTGGCCCTGGCCCGTGCGTTGATCCACCAGCCGCGCCTGCTGCTG
CTGGACGAACCGCTCGGCGCGCTGGACGCCCTGACCCGTATCGAGATGCAGCAACTGATCGAGCGCCTGTGGCGCCAGCA
TGGTTTCACCGTGCTGCTGGTCACCCACGACGTCAGCGAAGCCGTCGCCGTGGCCGACCGAGTGATCCTGATCGAGGATG
GCGCCGTCGGCCTGGACCTGGTCGTCGACCTGCCACGGCCGCGGGTGCGTGGTTCGCACCGCCTGGCGGCGCTGGAAAGC
GAAGTGCTCAACCGTGTTCTTTCCGTCCCGGGCACACCGCCCGAGCCGGAACCTGTAGCGCCTTTGCCCACGCACCTGCG
TTGGGCCCACTGA

Protein sequence : 
MTVLKEQPPRLLRGIPLAANDLRRTFGQREVLRGVDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPSGGELLAGAAPL
AEAREDTRLMFQDARLLPWKKVIDNVGLGLSGNWRPRALEALDAVGLAERAHEWPAALSGGQKQRVALARALIHQPRLLL
LDEPLGALDALTRIEMQQLIERLWRQHGFTVLLVTHDVSEAVAVADRVILIEDGAVGLDLVVDLPRPRVRGSHRLAALES
EVLNRVLSVPGTPPEPEPVAPLPTHLRWAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-33 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_606005.1 aliphatic sulfonates transport ATP-binding subunit NC_012469.1.7686878. Protein 3e-18 41
ssuB YP_606005.1 aliphatic sulfonates transport ATP-binding subunit NC_008702.1.4606598. Protein 1e-12 41