|
Name : gabD (PSEEN0189) Accession : YP_605978.1 Strain : Pseudomonas entomophila L48 Genome accession: NC_008027 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 197640 - 199082 bp Length : 1443 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGCAGCTCAAAGACGCTCAGTTGTTCCGCCAGCAGGCCTTCATCAACGGTGAATGGCTGGATGCGGACAGCGGTCAGAC CATCAAGGTGACCAACCCGGCCACCGGCGACGTGATCGGCACCGTGCCGAAGATGGGCGCCGCCGAGACCCGCCGCGCCA TCGAGGCCGCCGACAAGGCCCTGCCGGCCTGGCGCGCACTGACTGCCAAAGAGCGTGCCGGCAAGCTGCGTCGCTGGTTC GAGCTGATGATCGAGCACCAGGACGACCTGGCCCGCCTGATGACCACCGAGCAAGGCAAGCCACTGGCCGAAGCCAAGGG CGAGATCGCCTACGCCGCCTCGTTCATCGAGTGGTTCGCCGAAGAAGCCAAGCGTGTGTACGGTGACGTCATCCCTGGCC ACCAGCCCGACAAGCGCCTGATCGTCATCAAGCAGCCGATCGGTGTCACCGCCGCCATCACCCCGTGGAACTTCCCGGCC GCGATGATCACCCGTAAAGCCGGCCCGGCCCTGGCCGCTGGTTGCACCATGGTGCTCAAGCCCGCTTCGCAGACACCTTA CTCCGCCCTGGCCCTGGTCGAGCTGGCTACCCGTGCCGGCATCCCGGCTGGTGTGCTGAGCGTGATCACTGGCAGCGCCG GCGAAGTCGGCAGCGAACTGACCGGCAACTCCCTGGTACGCAAGCTGTCCTTCACCGGCTCGACCGAAATCGGTCGCCAG CTGATGGAAGAGTGCGCCAAGGACATCAAGAAGGTTTCCCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCCGACCTGGACAAGGCGGTCGAGGGCGCGATCATCTCCAAGTACCGCAACAACGGCCAAACCTGCGTCTGCGCCAACC GTATCTACGTGCAGGACGGTGTCTACGACGCGTTCGCCGAGAAGCTCAAGGCTGCGGTCGCCAAGCTGAAGATCGGTAAC GGCCTGGAAGAAGGCACCACCACTGGCCCGCTGATCGACGGCAAGGCTGTCGCCAAGGTCCAGGAGCACATCGAGGACGC CGTTTCGAAAGGCGCCAAGGTGCTGTCCGGCGGCAAGATCATCGAAGGCAACTTCTTCGAGCCGACCATCCTGGTCGACG TACCGAAAACCGCTGCCGTGGCCAAGGAAGAGACTTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCAAGGACGAGGCCGAA GTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCCTCGTACTTCTACGCCCGTGACATGAGCCGCGTGTTCCGCGT CGCCGAGGCCCTGGAGTACGGCATGGTCGGTATCAACACCGGCCTGATCTCCAACGAAGTCGCGCCGTTCGGTGGCATCA AGGCCTCGGGCCTGGGCCGTGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAGATCAAATACCTGTGCATCAGCGTC TGA Protein sequence : MQLKDAQLFRQQAFINGEWLDADSGQTIKVTNPATGDVIGTVPKMGAAETRRAIEAADKALPAWRALTAKERAGKLRRWF ELMIEHQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFAEEAKRVYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPYSALALVELATRAGIPAGVLSVITGSAGEVGSELTGNSLVRKLSFTGSTEIGRQ LMEECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDGVYDAFAEKLKAAVAKLKIGN GLEEGTTTGPLIDGKAVAKVQEHIEDAVSKGAKVLSGGKIIEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAE VIAMSNDTEFGLASYFYARDMSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCISV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-153 | 67 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-85 | 41 |
