Gene Information

Name : rdgC (PSEEN1411)
Accession : YP_607093.1
Strain : Pseudomonas entomophila L48
Genome accession: NC_008027
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1471059 - 1471979 bp
Length : 921 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTCAAGAACCTGCTGACCTACCGCCTGACCCAGGATGTCCCGTTCGAGCCTGAAGCGCTGGAAGCCGCCCTGGC
CAGCAAACCGGCGCGCCCCTGCGCCAGCCAGGAGCTGACCACCTACGGTTTCGTCGCCCCGTTCGGCAAGGGCGCCGACG
CTCCCCTGGTGCACGTCAGCGGTGAATTCCTGCTGATCGCCGCGCGTAAAGAAGAACGTATCCTGCCCAGCAGCGTGGTC
AACGACGCGGTCAAGGAGAAGGTCGAGGAGATCGAGACCGAGCAGATGCGCAAGGTCTACAAGAAGGAGCGCGACCAGAT
CAAGGACGAGATCATCCAGGCCTTCCTGCCGCGCGCGTTCATCCGCCGCTCGATGATCTTCGCCGCCATTGCCCCGCGCC
TGGGCCTGATCCTGGTCAACTCGGCCAGCGCCAAGCGCGCCGAGGACCTGCTGTCGACCCTGCGCGAAGTCATGGGGTCG
CTGCCGGTGCGCCCGGTGACCGTCAAGATCGCCCCGGCCGCGACCATGACCGACTGGGTCAAGTCGCAGCACGCCGCCGA
AGGCTTCTATGTGCTGGACGAGTGCGAGCTGCGCGACACCGGCGAAGACGGCGGCATCGTGCGCTGCAAGCGCCAGGACC
TGACCGGTGAAGAAATCCAGCTGCACCTGAGCACCGGCAAGGTGGTCACGCAACTGGCCCTGGCCTGGCAGGACAAGCTG
TCGTTCGTGCTCGACGACAAGACCGTGATCAAGCGCCTGAAGTTCGAGGAGCTGCTGCAAGAGCAGGCCGAGCAGGACGG
CGGCGATGAAGCCCAGCAGCAGTTCGACGCCAGCTTCACCCTGATGATGATGACCTTCACCGAGTTCCTGCCGGCGCTGT
TCGAGGCGCTGGGGGGCGAGGAGATTCCGCAAGGGGTCTGA

Protein sequence :
MWFKNLLTYRLTQDVPFEPEALEAALASKPARPCASQELTTYGFVAPFGKGADAPLVHVSGEFLLIAARKEERILPSSVV
NDAVKEKVEEIETEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSMIFAAIAPRLGLILVNSASAKRAEDLLSTLREVMGS
LPVRPVTVKIAPAATMTDWVKSQHAAEGFYVLDECELRDTGEDGGIVRCKRQDLTGEEIQLHLSTGKVVTQLALAWQDKL
SFVLDDKTVIKRLKFEELLQEQAEQDGGDEAQQQFDASFTLMMMTFTEFLPALFEALGGEEIPQGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-55 41