Gene Information

Name : Dgeo_0967 (Dgeo_0967)
Accession : YP_604436.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1034976 - 1035761 bp
Length : 786 bp
Strand : -
Note : PFAM: ABC transporter related: (7.4e-57); SMART: ATPase: (1.8e-19); KEGG: dra:DR2192 ABC transporter ATP-binding protein, ev=2e-84, 73% identity

DNA sequence : 
ATGCTAGCGCCCGGTGGCGCTCCTGCACAGCCCCACCTGCACGACAGCCCCGCCTGCGCTACAGTGCACCGCGTGACAAC
CCTGGTCCCCGCGCTCGCTGCCCACAACCTCCGGCACGGGTTTGGCGACACGCTCGTCCTGCACGGCGTCAGCCTAGCCG
TCCTGCCCGGCGAGGTGGTGGCGGTCTCGGGACCAAGCGGCAGCGGCAAGAGCACGCTGCTGCACCTGCTGGGCGGCCTG
GACACCCCGCAGGCGGGCGAGGTGTGGTGGGCGGGCGAGCGGGTGGACACGCTGGGGACGCAAGCGCGAGCAGGACGGCG
AGCAGGACGCGTCGGGCTGGTGTTCCAGCATCATTACCTTCTCGAAGACCTGAGCGTGCTGCAAAATGTGCAGGTGCCTG
CATTCCTCACCGGGCAGGACGGCATCAGCCGAGCACGCGAACTGCTGGCCCGTGTGGGCCTGGCGGCGCGTGAGGCCGAG
CTGCCGCGCGTGCTGAGCGGCGGCGAACGCCAGCGGGTGGCGGTGGCCCGCGCCTTGGCGACCCGCCCCGCCGTCGTCCT
GGCCGACGAACCCACCGGCAGCCTTGACCGAGCAAACGCAGACATCGTGGCGCGCCTGCTCCTCGACCTGGCCCGCGCGG
AGGGGGCGGGCGTGCTGCTGGTCACCCATGATGACCGCCTCGCCGCCCGCGCCGACCGGGTGCTGCACCTGCTCGACGGG
CGGATCGTGGAGGAAGAAGGCTTGGCGCTGTCAGCGGTCAGCTCTCAGCCAGCCGCGCGGGAGTGA

Protein sequence : 
MLAPGGAPAQPHLHDSPACATVHRVTTLVPALAAHNLRHGFGDTLVLHGVSLAVLPGEVVAVSGPSGSGKSTLLHLLGGL
DTPQAGEVWWAGERVDTLGTQARAGRRAGRVGLVFQHHYLLEDLSVLQNVQVPAFLTGQDGISRARELLARVGLAAREAE
LPRVLSGGERQRVAVARALATRPAVVLADEPTGSLDRANADIVARLLLDLARAEGAGVLLVTHDDRLAARADRVLHLLDG
RIVEEEGLALSAVSSQPAARE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 1e-15 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_0967 YP_604436.1 ABC transporter NC_008702.1.4606598. Protein 3e-22 45
Dgeo_0967 YP_604436.1 ABC transporter NC_012469.1.7686878. Protein 3e-35 44
Dgeo_0967 YP_604436.1 ABC transporter CP001581.1.gene798.p Protein 1e-27 41