Gene Information

Name : hemC (Dgeo_0093)
Accession : YP_603565.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 87831 - 88760 bp
Length : 930 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGCGTACGGTGACGGTTGGAACGCGCGGCTCGGCGCTCGCGCTCGCGCAGACCCGGTGGGTGGTGGCCCGCCTGAAGGA
GGAATGGCCGGACACGGACTTCCGGATCCAGACGATCAGCACCAAGGGGGACCGCGACCGCGCGGCCCTGCAGTCGCTGG
CCCAGAAGGGCGACAAGGGCTTCTGGGTCAAGGAGATTGAGGACGCCCTCTTGGCGGGCCGCATCGACATTGCGGTGCAT
TCCCTCAAAGACCTGCCGACCGAGCAGCCAGAGGGACTAGAGATCGCCTCGATTCCCAAACGGGTGGATGCCCGCGACGT
CTTGATCGGCAAGGATGGGATGAAGCGCTTGGAGGACCTGCCCTCCGGCGCCCGGGTGGGCACCAGCAGCGTTCGGCGCA
AGGCTTTTTTGCGCGCCTACCGCCCCGACCTGCAGATCCTCGACCTGCGCGGCAACATCGACACGCGCCTCGCCGCGCTG
GGCACGCCCGACTACGACGCGATTGTCCTGGCCGCTGCGGGCCTGATCCGCACCGAGATGCGCCACCGCATCGACGAGTT
CATCGATCCCGATCTCCTGCTCCCGGCACCTGGTCAGGGTGCGCTGGCGCTGGAAACCCGTGCCGACGACGACCTCAGCA
TCGAAGTGGTCTACGCCATCCATGATCACGCGACCGACGACCGCGTCACTGCCGAGCGAGAGTTCCTGGCGGGGTTGGGG
GCCGGGTGCATGGCCCCGGTGGGCGCCCACGCAACCCTGAAAGATGGCGTGCTGACGCTGGAAGGTTGGGTGGGGGCGCT
GGATGGCAGTCAGGTGATCCGCGCGACCACCTCCGGTGACCCGGCCGAGTGTGCTGACTTGGGGGCCGAGCTGGCCGCCG
ATATGCTGGGCCAAGGGGCGCAGCAACTGATTGAGGCCGCGCACAGATGA

Protein sequence :
MRTVTVGTRGSALALAQTRWVVARLKEEWPDTDFRIQTISTKGDRDRAALQSLAQKGDKGFWVKEIEDALLAGRIDIAVH
SLKDLPTEQPEGLEIASIPKRVDARDVLIGKDGMKRLEDLPSGARVGTSSVRRKAFLRAYRPDLQILDLRGNIDTRLAAL
GTPDYDAIVLAAAGLIRTEMRHRIDEFIDPDLLLPAPGQGALALETRADDDLSIEVVYAIHDHATDDRVTAEREFLAGLG
AGCMAPVGAHATLKDGVLTLEGWVGALDGSQVIRATTSGDPAECADLGAELAADMLGQGAQQLIEAAHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-46 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-46 47