Gene Information

Name : Dgeo_2180 (Dgeo_2180)
Accession : YP_605643.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : -
Position : 2298605 - 2299912 bp
Length : 1308 bp
Strand : -
Note : KEGG: dra:DR0443 pyrimidine-nucleoside phosphorylase, ev=0.0, 81% identity; TIGRFAM: Pyrimidine-nucleoside phosphorylase: (3.6e-228); PFAM: glycosyl transferase, family 3: (1.6e-35) Pyrimidine nucleoside phosphorylase-like: (4.8e-24)

DNA sequence :
ATGGCTCCATTGCCTCAGATTCCCGACCTGATTCGCAAGAAACGTGACGGCTTCGAGCATTCCCGTGCCGAGCTCGAAGC
CTTGGTGCTGGGTTACACCCGCGGTGAAGTGCCCGACTACCAGATCAGCGCCTGGCTGATGGCCGTGTATCTGAAGGGCA
TGACGCTGCAGGAAACGGCCGACCTGACCCAGGTGATGGCGGAAAGCGGCGAGCAGCTTGACCTCTCCGGGCTGCCGCGC
ACGGTGGATAAGCACTCCACCGGTGGTGTGGGCGACAAAACCAGCCTGATCCTCACGCCGATGCTGGCGGCCCTTGGCCT
CACGGTCGCCAAGATGAGCGGGCGCGGCCTGGCACACACCGGCGGCACCATCGATAAGCTCGAAAGCTTCCCCGGTTGGA
CTCCTGAGCTGTCCGAGGCGCAGTTTCTGACCCAGGCCCACGAGATCGGCCTCGCGCTGGTGGGCCAATCGAAGGATCTG
GCCCCCGCCGACGGCAAGCTGTACGCGCTGCGCGATGTGACAGCCACGGTAGACTGCCTGCCCCTGATCGCCTCCTCGAT
CATGAGCAAGAAACTCGCGTCGGGTGCCCACACCGTCGTGCTCGACGTGAAGGTGGGGGCAGGGGCCTTCATGCGGACCT
TGGAGGACGGTCGTGCCCTGGCCCGCGCGATGGTGGATATCGGTACGCGGGCTGGGCGCCAGGTTCGGGCTGTGCTGACC
GATATGGACACGCCGCTGGGCCACATGGCCGGAAACAGCCTGGAAGTGCAAGAAGCCCTCGCCACCCTGCGTGGGGAAGG
CCCCGCCGATCTGACCGAGCTGTGTGTGGCGCTGGCGGTGGAGGCGCTGGCGGCCTACGGCGAGGAGCCGGCGCAAGCCG
AGGCCCGCGCCCAGGCGACCCTGAGGGACGGCTCGGCTCTGGCAAAATTCCGCGCCTTCATTGCGGCGCAGGGGGGAGAC
GCGGCGCTGGTGGACCATCCCGAACGGCTGGACCTGGCCCCCGGACGCGCCGAGGTGACGGCCCCGTCCTCCGGGTACGT
GGAACGGGTGGACGCCCTGGCGGTGGGTCGGGCTGTCCTCGCGCTGGGCGGTGGGCGCGAGCGCAAGGGCGAGGCGATTG
ACCACGGTGTCGGTGTGGAGCTGCTCAAGAAACCTGGCGAGGCGGTGCAGGCGGGTGAGGCGGTGCTCCGTCTCTACCAC
AGAGAGGGTCGGGGCTTGGAGGCCGCACGGGGACTGCTGGAAGCGGGCCTGCGGGTGGGCGACACGCCGCCCGCGCCCGA
GCCGCTGATTCTGGACCGCGTGAACTGA

Protein sequence :
MAPLPQIPDLIRKKRDGFEHSRAELEALVLGYTRGEVPDYQISAWLMAVYLKGMTLQETADLTQVMAESGEQLDLSGLPR
TVDKHSTGGVGDKTSLILTPMLAALGLTVAKMSGRGLAHTGGTIDKLESFPGWTPELSEAQFLTQAHEIGLALVGQSKDL
APADGKLYALRDVTATVDCLPLIASSIMSKKLASGAHTVVLDVKVGAGAFMRTLEDGRALARAMVDIGTRAGRQVRAVLT
DMDTPLGHMAGNSLEVQEALATLRGEGPADLTELCVALAVEALAAYGEEPAQAEARAQATLRDGSALAKFRAFIAAQGGD
AALVDHPERLDLAPGRAEVTAPSSGYVERVDALAVGRAVLALGGGRERKGEAIDHGVGVELLKKPGEAVQAGEAVLRLYH
REGRGLEAARGLLEAGLRVGDTPPAPEPLILDRVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 9e-64 44