Gene Information

Name : Dgeo_2149 (Dgeo_2149)
Accession : YP_605612.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2261548 - 2262213 bp
Length : 666 bp
Strand : -
Note : PFAM: response regulator receiver: (2.3e-33) transcriptional regulatory protein-like: (5e-23); KEGG: dra:DR2418 DNA-binding response regulator, ev=1e-111, 93% identity

DNA sequence : 
GTGAGTGCCCAACGAATTCTCGTGATCGAGGACGATCTCGACATTGCCAACGTGCTGAGGCTGGACCTGACGGATGCGGG
GTATGCGGTCGAACATGCTGACTCGGCCATGAACGGCCTGATTCGCGCTCGCGAAGACCACCCCGACCTGATCCTGCTTG
ATCTCGGCCTGCCCGACTTCGACGGCGGCGACGTGGTGCAGCGCTTACGCAAGAACAGCGCCGTGCCGATTATCGTGCTG
ACCGCCCGTGACACGGTGGATGAAAAAGTCCGCCTGCTGGGCCTGGGCGCCGACGACTACCTGATCAAGCCTTTCCACCC
CGATGAGCTGATCGCCCGCGTCAAGGTGCAGCTGCGCCAACGTGTCAGTGAGAGTCTCAGCATGGGCGACCTGACGCTCG
ACCCTCAAAAACGGCTGGTGACCTACAAGAACGAGGAGTTGCGCCTCTCGCCCAAGGAGTTCGACATTCTGGCCCTGCTG
ATTCGCCAGCCCGGTCGGGTGTACTCGCGCCAGGAGATCGGCCAGGAAATCTGGCAGGGCCGCCTGCCGGAAGGCAGCAA
TGTGGTGGACGTGCACATGGCGAACCTGCGGGCCAAACTGCGCGACCTCGACGGGTATGGTCTGCTGCGGACCGTGCGCG
GCGTCGGCTATGCGCTGCGCGGCTGA

Protein sequence : 
MSAQRILVIEDDLDIANVLRLDLTDAGYAVEHADSAMNGLIRAREDHPDLILLDLGLPDFDGGDVVQRLRKNSAVPIIVL
TARDTVDEKVRLLGLGADDYLIKPFHPDELIARVKVQLRQRVSESLSMGDLTLDPQKRLVTYKNEELRLSPKEFDILALL
IRQPGRVYSRQEIGQEIWQGRLPEGSNVVDVHMANLRAKLRDLDGYGLLRTVRGVGYALRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-28 42
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 9e-24 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 6e-24 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_2149 YP_605612.1 two component transcriptional regulator AE000516.2.gene3505. Protein 3e-24 42
Dgeo_2149 YP_605612.1 two component transcriptional regulator BAC0347 Protein 1e-24 41
Dgeo_2149 YP_605612.1 two component transcriptional regulator BAC0125 Protein 1e-26 41
Dgeo_2149 YP_605612.1 two component transcriptional regulator BAC0197 Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_2149 YP_605612.1 two component transcriptional regulator VFG1390 Protein 2e-27 42
Dgeo_2149 YP_605612.1 two component transcriptional regulator VFG0596 Protein 1e-28 42
Dgeo_2149 YP_605612.1 two component transcriptional regulator VFG1389 Protein 2e-24 42