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Name : rplS (Dgeo_1738) Accession : YP_605202.1 Strain : Deinococcus geothermalis DSM 11300 Genome accession: NC_008025 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1846184 - 1846660 bp Length : 477 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGCAGAACATCAAGGTGAACCGCGGGGCGATCCTGCGCTCGGTCGAGCAGGCCCACATCAAGCAAGATCACCCGGACTT CCAGCCCGGCGACACGGTGCGCGTCGAAACAAAGGTCGTCGAGGGCAACCGTACCCGCAACCAGGCCTTCGAGGGTGTGG TTATCGCCATCAACGGAACGGGCAGCCGCAAGAGCTTTACGGTGCGCAAGATCTCTTTCGGTGAGGGCGTGGAGCGGGTG TTCCCCTTTAGCAGCCCCCTTGTCGCCAAGGTGACGGTGCTGGAACGTGGCAAGGTGCGCCGTGCCAAGCTGTACTACCT GCGCGAACTGCGCGGTAAGGCTGCCCGCATCAAGAGTGACCGCAGCCGCGTGATGAAGGATGCCGCCCGTGCGCAGCAGG CGCGGGACGCGGCCCAGGGCAACAGCTCCAGCGAGACTCAGAGCAGCACTGCAGCCGTCGAGACGCAGGGCGAGTAA Protein sequence : MQNIKVNRGAILRSVEQAHIKQDHPDFQPGDTVRVETKVVEGNRTRNQAFEGVVIAINGTGSRKSFTVRKISFGEGVERV FPFSSPLVAKVTVLERGKVRRAKLYYLRELRGKAARIKSDRSRVMKDAARAQQARDAAQGNSSSETQSSTAAVETQGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 6e-28 | 60 |
