Gene Information

Name : Dgeo_1708 (Dgeo_1708)
Accession : YP_605172.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1815934 - 1816599 bp
Length : 666 bp
Strand : +
Note : PFAM: regulatory protein, LuxR: (1.4e-19) response regulator receiver: (1e-36) Sigma-70, region 4 type 2: (0.00066); KEGG: dra:DR1558 DNA-binding response regulator, ev=1e-92, 82% identity

DNA sequence : 
ATGACCGATCCCACCCCTTCCCGACCCGTCCGCGTGCTGCTGGTCGACGACCACGCGGTGGTGCGCCAGGGCCTGCGCCT
CTTTTTGAGTCTCGATTCCCAGATCGAGGTCGTGGGCGAGGCGGCCAATGGCGAGGAAGCCCTCGCCGCAGCCGAGCGCC
TGCACCCCGACGTGGTGATCATGGACCTGATGATGCCCGTGATGGACGGCATCCAGGCCACCCGCTTGCTGCGCCGTCAG
CATCCCGACACCGAAGTCATCGCCCTGACCAGCACCCTAGAAGAACACAAGGTCAACGGTGCCATCGACGCCGGCGCGAT
GGGCTACATGCTCAAGGACGCTTCCTCAGACACGCTGGCCGACGCCATCCACGCCGCCGCGCGGGGGGAAGTGCGCCTGC
ATCCCGAGGCCGCCCGCCGCCTGGTTCGCGATTTCCGCACACCCGAGATGCGCGAGACGCTCACCCCCAAAGAAGTCATC
GTGCTGCAGCTGATCGCGCGCGGCTACTCCAACCGCGACATCGCCCGGGATCAGGGCGTGACCGAGGCGACCGTGAAAAC
GCATGTCAGCCGCCTGCTGGGCAAATTGGGGCTGGAGAGCCGGACCCAGGCGGCGCTGTATGCACTGCGGCACGGACTGG
CCAGGTTGGAGGAAACCGGCGGATAG

Protein sequence : 
MTDPTPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMDGIQATRLLRRQ
HPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVI
VLQLIARGYSNRDIARDQGVTEATVKTHVSRLLGKLGLESRTQAALYALRHGLARLEETGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_1708 YP_605172.1 LuxR family transcriptional regulator VFG1824 Protein 1e-18 41