Gene Information

Name : Dgeo_0125 (Dgeo_0125)
Accession : YP_603597.1
Strain : Deinococcus geothermalis DSM 11300
Genome accession: NC_008025
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 114973 - 116043 bp
Length : 1071 bp
Strand : +
Note : PFAM: transport system permease: (1e-116); KEGG: dra:DRB0015 hemin transport system permease, ev=1e-145, 76% identity

DNA sequence : 
GTGACGACCAACCTGACCTCCACTTCGGCCCCGGCTCTCAGCCGTCAGCGCGTCCGCGCACGTTGGGCGCTGGCGCTGCT
GCCCTTAGGACTGCTGGCGGCGGTGGTGTTCGCGGTGGGGACGGGGGCGGTCCATATCGCCCCCGCGCAGGTGGTCTCGA
TTCTGCTCGCGCCGCTGGGTGTGCCGCCCCTGGCTGCCTACGAGGAACAGCAGGCCGCGGTGCTGCACGCCATTCGCCTG
CCGCGTGTGGTTCTGGGCCTCCTGGTGGGCGCGGGGCTGGCAGTGGCGGGGACAGCCATGCAGGGGCTCTTCCGCAACCC
ACTGGCTGACCCTGGCTTGCTGGGCATCTCCAGCGGCGCGGGTCTGGCCGCTGCGCTGAGCGTGGTGCTGGGCATTCACC
TCTTTGGAACGTATACCCTGCCGGTGATGGCCTTTCTGGGCAGTGTTGCTGCGACGGGCGTCATCTACACGCTCGCGCAG
GAGCGGGGGCGGATGAACGTCGCCACCATGCTGCTCGCGGGGATTGCGGTCAACGCCTTGTGTGGGGCGGGGACCGGCTT
GATGACCTATCTCGCCACCGATGAACAGCTGCGCACCATCACCTTCTGGCAGCTCGGCTCGCTGGGGGGTGCAACCTGGC
CCACCGTGCTGAGCGCCGCACCGCTGCTGCTGGTGGGTGTGCTGGGCCTGCCGCTGCTGGCCCGCGCCCTCAACGCCTTC
ACGCTGGGTGAGAGCAATGCCGCGCACCTGGGTATTCCCGTGACCGCCGTGAAGTGGGCGGTCGTGGGGCTGGTGGCCCT
CAGTGTGGGTGCCGGTGTGGCGGTGGCTGGCACCATTGGCTTTGTCGGCCTGGTCGTGCCGCACCTGATGCGGCTGTTGA
TTGGTCCGAACCACGCCACGCTGCTGCCTACCGCTGCTCTGGCGGGGGCCACGCTGCTGGTGCTGGCCGATCTGCTCGCG
CGCACGGTTGTGATGCCGTCCGAGCTGCCCATTGGCATCGTGACCGCGCTGCTGGGGGCACCCTTCTTCCTGTACCTGTT
GCGGCAAAGCCGCAGGGGAGAGCGCCTGTGA

Protein sequence : 
MTTNLTSTSAPALSRQRVRARWALALLPLGLLAAVVFAVGTGAVHIAPAQVVSILLAPLGVPPLAAYEEQQAAVLHAIRL
PRVVLGLLVGAGLAVAGTAMQGLFRNPLADPGLLGISSGAGLAAALSVVLGIHLFGTYTLPVMAFLGSVAATGVIYTLAQ
ERGRMNVATMLLAGIAVNALCGAGTGLMTYLATDEQLRTITFWQLGSLGGATWPTVLSAAPLLLVGVLGLPLLARALNAF
TLGESNAAHLGIPVTAVKWAVVGLVALSVGAGVAVAGTIGFVGLVVPHLMRLLIGPNHATLLPTAALAGATLLVLADLLA
RTVVMPSELPIGIVTALLGAPFFLYLLRQSRRGERL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 5e-05 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_0125 YP_603597.1 transport system permease BAC0163 Protein 3e-05 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dgeo_0125 YP_603597.1 transport system permease VFG0922 Protein 1e-23 46
Dgeo_0125 YP_603597.1 transport system permease VFG1043 Protein 3e-05 42