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Name : LI0580 (LI0580) Accession : YP_594955.1 Strain : Lawsonia intracellularis PHE/MN1-00 Genome accession: NC_008011 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate-sugar epimerases Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 711302 - 712312 bp Length : 1011 bp Strand : - Note : - DNA sequence : ATGAATGTGCTTGTCACTGGTGCTGCTGGTTTTATTGGTTTCCATTTATGTCGTCGATTACTTGATGAAGGGCATTCAGT TGTAGGTATTGATAATCTCAATGACTATTATTCAGTTACTTTGAAAAAAGATAGATTGGCACTTTTAATGGATGAGCCTA ATTTTACATTTTCCTCTATAGACATAGTAAATCTACCTAACCTTCAAGAGCTTTTTTTACAATACCGATTTAGTCATGTT GTCAACTTAGCTGCACAGGCAGGTGTACGATATAGTATTGAAAACCCTTCATCTTATATCCAATCTAATCTTGTAGGATT TGGGAATATTCTTGAATGTTGTCGTCATACTGAAGTGGAACATTTAGTTTTTGCTTCTTCAAGTTCTGTTTATGGACTCA ACACGTTAATGCCATTTTCAGTACATCAGGGTACTAATCATCCTATAAGTTTATACGGAGCCTCAAAAAAAGCTAATGAA CTTATGGCTCATGCTTATAGTCATTTATATAATCTACCATCAACAGGATTACGCTTTTTTACTGTATACGGTCCATGGGG AAGACCAGATATGGCTTTGTTCCTTTTTACAAAGGCAATTCTTTCTGGTGAACCTATTAGTGTATTTAATGAAGGAAGAA TGAGGAGAGATTTTACATATATTGATGACATTATTGAGGGAGTTATTCGAGTGATGAAAAAAACTCCTAAGATAAATGAG AATTGGAATAGTCATTCTCCAGATCCTTCTTCAAGTAAGGCTCCTTGGAAGATATACAATATCGGTAATAATAATACTGT CCAGTTGAGTGAGTTTATAGAAGTACTTGAAGTAGAGTTAGGTAAGAAAGCTATAAAGGAATACTTACCTATGCAACCTG GTGATGTTGAAGCAACATGGGCAGATATAGATGATCTTAAACATGATGTAGATTTTTCTCCGAATACTCCTATAGAATAT GGAATTAAGAAGTTTGTAGAGTGGTATAAGTCGTATTACCTCATAGCATAG Protein sequence : MNVLVTGAAGFIGFHLCRRLLDEGHSVVGIDNLNDYYSVTLKKDRLALLMDEPNFTFSSIDIVNLPNLQELFLQYRFSHV VNLAAQAGVRYSIENPSSYIQSNLVGFGNILECCRHTEVEHLVFASSSSVYGLNTLMPFSVHQGTNHPISLYGASKKANE LMAHAYSHLYNLPSTGLRFFTVYGPWGRPDMALFLFTKAILSGEPISVFNEGRMRRDFTYIDDIIEGVIRVMKKTPKINE NWNSHSPDPSSSKAPWKIYNIGNNNTVQLSEFIEVLEVELGKKAIKEYLPMQPGDVEATWADIDDLKHDVDFSPNTPIEY GIKKFVEWYKSYYLIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-100 | 60 |
